Pairwise Alignments

Query, 1376 a.a., two-component system sensor histidine kinase/response regulator, hybrid ('one-component system') (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 1374 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

 Score =  559 bits (1440), Expect = e-163
 Identities = 404/1417 (28%), Positives = 687/1417 (48%), Gaps = 122/1417 (8%)

Query: 3    TYIAAFFLLLSATFVAAHPYLIQRLGIEQGLSNNYVLSITQDKQGFLWFATEEGLNKFDG 62
            T++ A  L  +   V    Y+I+  GI +GL +    +  +DK+GF+W  TE GL KFDG
Sbjct: 18   THVKAQELRTNNQPVLTGHYVIKTYGINEGLPSKSTTAALKDKRGFIWVGTENGLCKFDG 77

Query: 63   TRFITYYKEEQSSSVQSITGNELNEVYTDPVQPVIWIATQRAGLNAYNYETQSFSVYQYN 122
              F  Y     +    S+T N +N V  D    V W+ T   GLN ++  T+ F  + + 
Sbjct: 78   YAFKIYVNI--TGDTTSLTNNYINAVVEDK-NGVFWVGTMN-GLNKFDPVTEKFERFYHK 133

Query: 123  PEDPQSLITNDVTHITSSVQAGKGLWVCTYYRGIEYLDIATGKFTHYNKS--TVPALPSE 180
              +  SL  N +  +   +     LWV T   G    +  +  FT Y        A+  +
Sbjct: 134  ENNRTSLSNNKIWSLL--IDRTNKLWVGTD-DGFNLFNKNSNAFTVYQPDFKDPDAIKGK 190

Query: 181  QTWTATEAEDGKLYIGHVEGGLSILSLNDKSVKHFVHDPQNPNSLPGNDVRCIYKDTNGN 240
                  E + G L++G+   GL+      KS K++          P ND+  +  D +G 
Sbjct: 191  SVNAIAEDKAGNLWLGNWSKGLNKFDKKTKSFKNYTQKEVAGEKNP-NDIWTLCLDADGM 249

Query: 241  IWIGTS-KG-LALFNANTETFTNFHNNPGNIHGALSSYIFSIKQLKDNKLWIATELNGIM 298
            IWIG+  KG L  F+  +E+FT + +      G  ++ IFS+  L   KL +     G+ 
Sbjct: 250  IWIGSYWKGDLFRFDPKSESFTTYASK-----GTGNASIFSVLNLGTEKLLVGGSA-GVF 303

Query: 299  ILDLQQNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDSFNNIWIGTWGGGINFISNA 358
             ++ + N++   E++ F F   G             +++D    IWI    G        
Sbjct: 304  WVNTKLNKWEKIEELEF-FANGG-------------LYRDKSGMIWICGKNG-------- 341

Query: 359  PPTFHTWSYSPTQMNESSL--SNKVVSSVCDDGQGKLWIGTDGGGINVFENGKRVA-IYN 415
               F    ++  + N  SL      + S+   G+   W+GT+ G      +   V+ + +
Sbjct: 342  ---FSKIDFNQYKFNFISLPFGQAEIKSIISYGKD-FWVGTNKGLFKYNPDNHAVSKLQH 397

Query: 416  KENRELLSNSVLCSLK-DSEGNLWFGTYLGNISYYNTRLKKFQIIELEKNELL------D 468
              N   LS+S + +L  D +  LW     G    Y+ +  KF  I       L      D
Sbjct: 398  TGNPNSLSSSEIINLSTDLKNRLWVMGENG-FDRYDEKANKF--IHHHHRSALGSFFNED 454

Query: 469  V-RVFYEDKNKKIWIGTHAGVFVIDLASKKVIHHYDTSNSQ--LLENFVRSIAQDSEGRF 525
            V R   E    + ++ T AG+ V +  +    H+++   +Q  L  N +  + +D++G  
Sbjct: 455  VFRDLIEVNADEYYLATDAGLKVYNDKTNSYTHYFNDPKNQASLSNNHLYCLLKDAQGNV 514

Query: 526  WIGTFGGGVGIYTPDMQLVRKFNQYE-------GFCSNTINQIYRSSKGQMWLATGEGLV 578
            WIGT+G G+  + P     RKF+ Y        G  +N +N +Y  S   +W+ T +GL 
Sbjct: 515  WIGTYGSGLSRFNPK---TRKFSNYMINNSKRGGISNNIVNSLYLDSHQNVWVCTRDGLN 571

Query: 579  CFPSARNFDYQVFQRKEGLPNTHIRAISEDKNGNIWASTNTGISCYITSKKCFYTYDHSN 638
             + +  N  ++++ ++ G  +     + ED NG +W +T  GIS +    K    YD  +
Sbjct: 572  KYIAKTN-TFEIYSKQNGFASNVFTDLVEDNNGRLWVTTEQGISLFDPVSKMVKNYDEKD 630

Query: 639  NIPQGSFISGCVTKDHNGLIYFGSINGLCFFNPDIAINSPQIPPV------VITKVRIPG 692
                G + +  + K+  G IY     G+ +FNP +   +   P V      +  K+ +PG
Sbjct: 631  ----GVYANAAICKNAKGEIYLAGSKGIVYFNPQLLKYNKTAPAVYFSDFSIFNKLILPG 686

Query: 693  RLTSREKNETAIPI-SEGEIELTHEQNSFNLTFNVQDYSLANQVEYAYMLKGLENSWYTI 751
                 + +   +P+    EI L + Q+  +  F   +Y+L+ + +YAY L+G +  W   
Sbjct: 687  -----DDSPLKLPVYMTREITLPYSQSVLSFGFVALNYTLSEKNKYAYFLEGFDKKWNYS 741

Query: 752  NEQNSVTFRNIPPGKYEFLVKARLHNQDWSEDTTSLRIHINPPLWLTWWAKLIYILITIS 811
              ++ VT+ N+ PGKY   V+A  ++  W+ +  S+ I I PP + TWWA  IY L    
Sbjct: 742  GSEHKVTYTNLNPGKYVLKVRASNNDGIWNMEGNSIGITITPPWYRTWWAFCIYGLTFFG 801

Query: 812  IIYTIIHAYKKKIDLESLYTLEKKNHEQEQELNQERLRFYTNITHELRTPLTLILGPLED 871
            +IY  +   + + +LE    L     E+E+EL++++L F+TN++HE RTPLTLI+ P+++
Sbjct: 802  MIYAYLKYREHRANLEFQVKLAHVESEKEKELSEKKLSFFTNVSHEFRTPLTLIINPVKE 861

Query: 872  M--QKDTSLPTRQAQKLSVIHLSALRLLNLINQILEFRKTETQNKKLCVCKGNIVPLIHE 929
            +  + D ++ T     L++++ +A RLL+L++Q+L FRK +T  +KL V   N+V L  E
Sbjct: 862  LLYKNDKNVDTTD---LNIVYRNAKRLLSLVDQLLLFRKADTYGEKLKVAPVNLVSLCKE 918

Query: 930  IGLKYKELNQKKAIDFQIQIEKEEMPLFFDKEIITIILDNLISNAIKYTEQGKITLSLYP 989
            + L +    + K I        E +P + D+E I I+  NL+SNAIK+T +G     +  
Sbjct: 919  VFLCFVHQARSKNIVLDFIGTDEVIPFYADREKIEIVFFNLLSNAIKFTPEGGTVKMIVG 978

Query: 990  TTRNGVTYTEIKVSDTGYGISAEALPHVFDRYYQESGKHQA-SGTGIGLALVRNLVELHE 1048
                 +   ++ + DTG GI+  A   +++++YQ+ G   A  G GIGL L +N +E+H 
Sbjct: 979  NRGEDI---QVGIEDTGCGITTVAGEKLYEKFYQDPGNKSAKGGFGIGLYLAKNFIEMHG 1035

Query: 1049 GEIRVESIQNEGSTFYISL------LTDNIYPNALHGDSTKQTEEEMIS---------EA 1093
            G I   S +N+G+ F ISL        D +       D+     +E+I          EA
Sbjct: 1036 GTINYTSTENKGTIFNISLRRGISHFKDAVILQEALVDTDSSLFKELIEDEITANKIVEA 1095

Query: 1094 VPEDSQNTEPETSKPILLIVEDNEDIQKYIAESFSDSFEVITGSNGEEGKQQALNRIPDI 1153
              E   +++       LLI++DN +I++Y+ + F   + +    NGE+G       +PDI
Sbjct: 1096 AEEPLIDSQLALDLKTLLIIDDNIEIREYLKQVFRMDYHLYEAGNGEDGYDMVKELLPDI 1155

Query: 1154 IVSDIMMPVMDGITLCRQLKEDVRTSHIPVILLTAKDSLQDKEEGYEVGADSYLTKPFSA 1213
            ++ D+MM  + GI LC ++KEDV  SHIP+ILLTA  + + K +G E GAD Y++KPF  
Sbjct: 1156 VICDVMMDGITGIELCSKIKEDVAVSHIPIILLTAISAPEVKLKGIEGGADDYISKPFDK 1215

Query: 1214 SLLRSRINNLLDSRKKLIAQFQQTGTNHNPNSHLDEKRSIITEALSKLDNEFIEKITQLV 1273
              L++R+ ++L S+  L   F    T ++ N+ +  +             EF++   ++V
Sbjct: 1216 DFLKARVASILKSKNALQRYFYNEITLNSNNTKISAEY-----------KEFLDHCIRIV 1264

Query: 1274 EDNLSSEKIDITYLSDKMCMSGSTLYRKMKALTGLSTNEYIRKVKMQNAERLLLEGKYNI 1333
            E++L     +I  L+  + MS S LYRK+K+++G S N +IR ++++ A  + +     I
Sbjct: 1265 EEHLIDPDFNIDTLTATIGMSRSNLYRKIKSISGQSANGFIRFIRLRKAAEIFINTDKTI 1324

Query: 1334 SEIAYKIGMNSTGYFRQCFKDEFGVSPSDYLKQFTSP 1370
             E +Y +G+N   YFR+ F   F ++PS Y+K+F  P
Sbjct: 1325 QETSYMVGINDPKYFREQFYRLFNMNPSQYIKKFRKP 1361