Pairwise Alignments

Query, 1376 a.a., two-component system sensor histidine kinase/response regulator, hybrid ('one-component system') (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 1347 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

 Score =  612 bits (1577), Expect = e-178
 Identities = 413/1395 (29%), Positives = 706/1395 (50%), Gaps = 96/1395 (6%)

Query: 8    FFLLLSATFVAAHPY-LIQRLGIEQGLSNNYVLSITQDKQGFLWFATEEGLNKFDGTRFI 66
            F ++L   F   H   L   LGIE+GLSNN V +I +D  GF+WF T++GLN+++G  F 
Sbjct: 10   FLIILIIRFTDLHAQDLFSHLGIEKGLSNNSVNAIYKDHFGFMWFGTDDGLNQYNGYSFR 69

Query: 67   TYYKEEQSSSVQSITGNELNEVYTDPVQPVIWIATQRAGLNAYNYET-------QSFSVY 119
             Y      SS  S+  N++  +  D     +WIAT+R     +++ +       ++++  
Sbjct: 70   IYRNNPNDSS--SLVNNQVIGMAEDG-SGTLWIATKRGVSVLHSFPSKFVKPIFKAYNDK 126

Query: 120  QYNPEDPQSLITNDVTHITSSVQAGK-GLWVC-TYYRGIEYLDIATGK--FTHYNKSTVP 175
            +  P D +        H    + A   GL V   + R    +    G+   T Y+   + 
Sbjct: 127  KARPIDQEIYAIKGGNHGDVFIGASDLGLLVYDNHSRETRQVSFQPGEKVLTPYSIRAIR 186

Query: 176  ALPSEQTWTATEAEDGKLYIGHVEGGLSILSLNDKSVKHFVHDPQNPNSLPGNDVRCIYK 235
             +  ++ W    A+ G  Y  +    +S++S N         D +N NS        I  
Sbjct: 187  PV-QDRAWLINPAK-GLAYYDYRSKQISLVSSNG--------DIRNANS--------IEA 228

Query: 236  DTNGNIWIGTSKGLALFNANTETFTNFHNNPGNIHGALSSYIFSIKQLKDNKLWIATELN 295
            D +GN+WIGT  GL  +N   ++F  +   PG +   L+  I S+   + N+L IAT+  
Sbjct: 229  DQSGNLWIGTDHGLYRYNILAKSFKWYSVAPGQL---LAQRILSLAFDRRNRLLIATDGG 285

Query: 296  GIMILDLQQNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDSFNNIWIGTWGGGINFI 355
            GI I+D ++          F +   G++  SL++ +   I +D  + IW+GT  GGIN +
Sbjct: 286  GINIMDTEKES--------FSYQTAGESPSSLNSNAISVILKDEEHRIWVGTLRGGINVL 337

Query: 356  SNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGKLWIGTDGGGINVFENGKRVAIYN 415
                  F     +P  +++ SL +  + S C+D  GK+WIGTDGGGI++++  K    Y 
Sbjct: 338  DRKRNEFKHIYRNP--LSQQSLVSDFILSFCEDRDGKIWIGTDGGGISLWDRLKGFKTYR 395

Query: 416  KEN---RELLSNSVLCSLKDSEGNLWFGTYLGNISYYNTRLKKFQIIELEKNELLDVRVF 472
             EN   + L SN+V   ++ +   +W  T+ G I+ YN     F+      +   D  V+
Sbjct: 396  HENGNPQSLSSNNVTSIVRSNNDVIWIATFGGGINRYNRGSGTFKYYPCANSWGKDENVW 455

Query: 473  --YEDKNKKIWIGTHAGVFVI---DLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWI 527
              + DK   IW GT  GV ++   ++AS +    ++  N++ L+N + +I +D  G  W 
Sbjct: 456  KLFIDKKGGIWAGTCVGVGLLYHYNVASDR----FEPFNNEHLKNII-AINEDKLGNLWF 510

Query: 528  GTFGGGVGIYTPDMQLVRKFNQYEGFCSNTINQIYRSSKGQMWLATGEGLVCFPSARNFD 587
            G+F   +  YT   +++    +Y       I  I+ +  G +++ T    +   +++N  
Sbjct: 511  GSF-NKLYKYTAGGKVITYDIRY------PIRSIFFNKSGDLFVGTQYAGLLKYNSKNGS 563

Query: 588  YQVFQRKEGLPNTHIRAISEDKNGNIWASTNTGISCYITSKKCFYTYDHSNNIPQGSFIS 647
            +Q F   +GL N  +  I ED + N+W ST  G++ +      F  +   N +    F  
Sbjct: 564  FQAFTESDGLSNNTVLNIEEDDHANLWLSTFNGLTKFNYRNNTFNKFYIENGLQCNEFNY 623

Query: 648  GCVTKDHNGLIYFGSINGLCFFNPDIAINSPQIPPVVITKVRIPGRLTSREKNETAIPIS 707
                   +G + FG I G   FNPD  +N+   PP+ +T +R        +   +A    
Sbjct: 624  NASAHLRSGQLLFGGIKGFNIFNPDSIMNNSAFPPLRLTDLRASNEPLISDAAYSASLYD 683

Query: 708  EGEIELTHEQNSFNLTFNVQDYSLANQVEYAYMLKGLENSWYTINEQNSVTFRNIPPGKY 767
              EI++ +++   +  ++  +YS  +++ Y+Y L+GLEN+W  +    S  +  +  G Y
Sbjct: 684  TKEIKIPYDRALLSFDYSALEYSFPSRISYSYYLEGLENNWNNVRTARSGNYSRLHEGTY 743

Query: 768  EFLVKARLHNQDWSEDTTSLRIHINPPLWLTWWAKLIYILITISIIYTIIHAYKKKIDLE 827
               +++      W+    +L+I I PP + +WWA L Y+ I   ++Y        ++ L 
Sbjct: 744  VLHIRSTNGEGIWNPRQLTLKIIILPPWYRSWWAYLTYLAIISYLLYRFNRYKSNQVRLN 803

Query: 828  SLYTLEKKNHEQEQELNQERLRFYTNITHELRTPLTLILGPLEDMQKDTSLPTRQAQKLS 887
                +   N E+E+ELN+ +L F+T+I+HE R+PLTLI+ P++++   +S        LS
Sbjct: 804  YQIEMATANAEKERELNERKLSFFTHISHEFRSPLTLIINPVKELLY-SSGKNIDVSDLS 862

Query: 888  VIHLSALRLLNLINQILEFRKTETQNKKLCVCKGNIVPLIHEIGLKYKELNQKKAIDFQI 947
            +++L+A RLL+L++Q+L FRK + +   L + K NIV +  ++ L +    + K ID   
Sbjct: 863  IVYLNAKRLLSLVDQLLLFRKADHEEDDLKISKLNIVLVCKDVFLCFTSQARLKNIDITF 922

Query: 948  QIEKEEMPLFFDKEIITIILDNLISNAIKYTEQGKITLSLYPTTRNGVTYTEIKVSDTGY 1007
            +  +E + +F D+E I I+L N++SNA K+TE+     S++    +      I + D G 
Sbjct: 923  ESAEEYIEIFADREKIEIVLFNILSNAFKFTEKNG---SIHVKVEDYDGRIAILIQDNGR 979

Query: 1008 GISAEALPHVFDRYYQESGKHQAS--GTGIGLALVRNLVELHEGEIRVESIQNEGSTFYI 1065
            GI  E    +FD++YQ    +  S  G GIGL L +  +  H+GE+   S   EG+ F I
Sbjct: 980  GIHPEIGDKLFDKFYQAPKSYNVSVKGFGIGLYLAKKFITSHKGELTYHSEIGEGTVFRI 1039

Query: 1066 SLL--TDNIYPNALHGDST-----------KQTEEEMISEAVPEDSQNTEPETSKPILLI 1112
             LL   +++    +H + T           ++ EE + +   P+  +     + +P +LI
Sbjct: 1040 ELLKGLEHLAGITVHHEDTEFIMPDLDLAEEEAEEPVTAMEQPDSGELDNLVSEQPAILI 1099

Query: 1113 VEDNEDIQKYIAESFSDSFEVITGSNGEEGKQQALNRIPDIIVSDIMMPVMDGITLCRQL 1172
            V+DNE  ++YI   F +SF +    +GE+G  +A  ++PDII+SD+ MPV DGI LC ++
Sbjct: 1100 VDDNELFRQYIKRIFKESFIIYEAVDGEDGLIKAKKQLPDIIISDVTMPVKDGIQLCTEI 1159

Query: 1173 KEDVRTSHIPVILLTAKDSLQDKEEGYEVGADSYLTKPFSASLLRSRINNLLDSRKKLIA 1232
            K D   SHIPVILLT+  S + K +G E GA+ Y+TKPF A LL +RINN+L SR  L  
Sbjct: 1160 KADPAISHIPVILLTSSTSSEIKLKGLECGAEDYITKPFEAELLTARINNILKSRNSLQR 1219

Query: 1233 QFQQTGTNHNPNSHLDEKRSIITEALSKLDNEFIEKITQLVEDNLSSEKIDITYLSDKMC 1292
             F    T    N           + +S    EF+ K   + E +L +   +   L++++ 
Sbjct: 1220 YFYNAVTLQADN-----------QKISPTFKEFLSKCISITERHLDNPDFNTKVLANEVG 1268

Query: 1293 MSGSTLYRKMKALTGLSTNEYIRKVKMQNAERLLLEGKYNISEIAYKIGMNSTGYFRQCF 1352
            MS S LY+K+K+++G S NE+IR ++++ A  LL++    ++E A++ G N+  YFR+ F
Sbjct: 1269 MSHSALYKKVKSISGKSINEFIRFIRLRKAAELLIQTDSRVNEAAFRAGFNNQKYFREQF 1328

Query: 1353 KDEFGVSPSDYLKQF 1367
               F ++PS+Y+K++
Sbjct: 1329 TKLFEMTPSEYIKKY 1343