Pairwise Alignments

Query, 194 a.a., FKBP-type peptidyl-prolyl cis-trans isomerase, outer membrane protein precursor (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 255 a.a., peptidylprolyl isomerase, FKBP-type (RefSeq) from Shewanella loihica PV-4

 Score =  156 bits (394), Expect = 3e-43
 Identities = 93/208 (44%), Positives = 124/208 (59%), Gaps = 23/208 (11%)

Query: 3   KFSYAIGLGIGQ----NLLSMGAKGIAVD------DFAQAIKDVLEGNQTAISHQEAREI 52
           K +Y++G  IG+    ++      G+ VD       F+  + D L+     ++ +E + +
Sbjct: 40  KQAYSVGASIGKYMSGHIKEQEELGLPVDRSLIIQGFSNGLNDELK-----LTEEEMQTV 94

Query: 53  VNKYFEELEAKMGAAAIE-------QGKAFLEENKKKPGVVTLPSGLQYEVINEGTGKKA 105
           +    E+L  K  A A         +  AFLE NK K GV T  SGLQYEVI EGTG K 
Sbjct: 95  LQGLDEQLNEKRQAQATALAEKAKAESAAFLEANKAKEGVTTTDSGLQYEVITEGTGDKP 154

Query: 106 KATDQVKCHYEGTLIDGTLFDSSIKRGEPAVFGVNQVIPGWVEALQLMPEGSKWKLYIPS 165
            A D V+ HY GTLIDGT FDSSI RG+ A F +N+VIPGW E +QLM  GSK++  IP+
Sbjct: 155 SAEDTVEVHYVGTLIDGTEFDSSIARGQSAKFPLNRVIPGWTEGVQLMSVGSKYRFVIPA 214

Query: 166 DLAYGARGAGEMIPPHSTLVFEVELLEV 193
           +LAYG+R  G  IP +STL+FEVELL +
Sbjct: 215 ELAYGSRDTGS-IPANSTLIFEVELLSI 241