Pairwise Alignments

Query, 194 a.a., FKBP-type peptidyl-prolyl cis-trans isomerase, outer membrane protein precursor (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 267 a.a., peptidylprolyl isomerase, FKBP-type (RefSeq) from Shewanella loihica PV-4

 Score =  137 bits (346), Expect = 1e-37
 Identities = 86/203 (42%), Positives = 120/203 (59%), Gaps = 17/203 (8%)

Query: 5   SYAIGLGIGQ-------NLLSMGAKGIAVDDFAQAIKDVLEG-----NQTAISHQEARE- 51
           SYA+G  +G        N + +GA+ I VD   Q + D L+G     N+  ++H  AR  
Sbjct: 43  SYALGASVGHYISGKIYNQVDLGAQ-IKVDTVIQGVIDALKGEGKMSNEEILTHLNARAE 101

Query: 52  -IVNKYFEELEAKMGAAAIEQGKAFLEENKKKPGVVTLPSGLQYEVINEGTGKKAKATDQ 110
            + N    +LEA + +    +G+A+L  N+ KPGV    SGLQYEVI +G G K   +D 
Sbjct: 102 WLNNAKAAKLEA-LASKHQAEGQAYLAANQAKPGVKVTESGLQYEVIKQGDGPKPVESDV 160

Query: 111 VKCHYEGTLIDGTLFDSSIKRGEPAVFGVNQVIPGWVEALQLMPEGSKWKLYIPSDLAYG 170
           V  HY G L+DGT FD+S +R EP  F +  VI GW E + LM  GS ++L IP++LAYG
Sbjct: 161 VTVHYVGKLLDGTEFDNSYERDEPNRFALLSVIDGWKEGIALMNVGSTYRLTIPAELAYG 220

Query: 171 ARGAGEMIPPHSTLVFEVELLEV 193
               G +IPP STL+F+VELL++
Sbjct: 221 KEVVG-VIPPGSTLIFDVELLKM 242