Pairwise Alignments

Query, 980 a.a., conserved hypothetical protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 377 a.a., family 88 glycosyl hydrolase from Pedobacter sp. GW460-11-11-14-LB5

 Score =  193 bits (490), Expect = 2e-53
 Identities = 127/386 (32%), Positives = 193/386 (50%), Gaps = 47/386 (12%)

Query: 5   LLILFLSIAYLCTTHAQSFTKLEVKQSMRRV-ADWQIGH-------YNRAVYGDLNWV-- 54
           LL L+L  + +      S +K EV + + R  A WQ  +       ++ A Y   N    
Sbjct: 8   LLFLWLFFSSIVLNAQTSTSKEEVLEMLNRANAYWQNNNKPEVRAFWDHAAYHTGNMELY 67

Query: 55  ----NATFFLGLAYWAEI-----AEKDDQDDFYYKWLTRLGSRNYWQVDKRMYHADDICI 105
               N T+      WA       A+  D+  + YK         Y + D+ +   D    
Sbjct: 68  GITRNETYRKYSEDWAVYNQWMGAKSTDKSKWKYK---------YGETDEYVLFGDWQIC 118

Query: 106 AQTYLYLYEKYKQKDMIVPTLARTEWVVANPPSGSFQLTYGDATTLEHWTWCDALFMAPP 165
            QTY+ LY    ++  I       ++ ++ P S             ++W W D L+M  P
Sbjct: 119 FQTYIDLYHLKPEEYKIARAKEVMQYEMSTPNS-------------DYWWWADGLYMVMP 165

Query: 166 VYLKLYNITGDKKFIRFMDKEYKATYEFLFDKEENLFYRDHRYF--DMKESNGAKVFWGR 223
           V  KLY +TGD+K++  + + ++     ++DK+E L+YRD +Y     K +NG K FW R
Sbjct: 166 VMTKLYKVTGDQKYLDKLYEYFRYANSIMYDKKEKLYYRDAKYVYPKHKSANGKKDFWAR 225

Query: 224 GNGWVLGGLVEMLRELPAKSKYRPFYQELFQKLCYRIANLQSSDGFWRASLLDPDAYPSP 283
           G+GWV  GL ++L++LP    +R  Y   +  +   I   Q ++G+W  S+LD    P P
Sbjct: 226 GDGWVFAGLAKVLKDLPLNDPHRNEYLTKYLNMAKAIVKSQQAEGYWTRSILDAQHAPGP 285

Query: 284 ETSCSGFFVYALAYGLNEGLLPKEKFLPVVEKGWKAL-LSAVEEDGKLGYVQPIG--ADP 340
           ETS + FF Y L +G+N G L ++ +LP  +K W  L  +A++ +GKLGYVQPIG  A P
Sbjct: 286 ETSGTSFFTYGLLWGINNGYLKEKTYLPAAQKAWTYLSRTALQPNGKLGYVQPIGEKAIP 345

Query: 341 KKVTR-NMTEVYGPGAFLLAGTEMYR 365
            +V   N T  +G GAFLLAG+EMYR
Sbjct: 346 GQVVDVNSTANFGIGAFLLAGSEMYR 371