Pairwise Alignments

Query, 367 a.a., multidrug resistance protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 388 a.a., HlyD-family protein from Sinorhizobium meliloti 1021

 Score =  134 bits (338), Expect = 3e-36
 Identities = 100/358 (27%), Positives = 172/358 (48%), Gaps = 12/358 (3%)

Query: 13  GIVGCTVWMASCKQAPDAGVKSSYAVMQIEPTDKELSSSYSATIRGRQDIDIYPQVSGTI 72
           G++ C+      +  P  GV      M ++  +   +  +   +     +DI  +V G +
Sbjct: 17  GLLLCSAGDGVAQTGPVVGV------MTVQVENVSPAHEFVGRVEALNAVDIRARVEGFL 70

Query: 73  EKLCVTEGQKVRRGQLLFIIDQVPYRAALKTATANVEAARAATSTAELTYKSNKELYAQK 132
           E+    EGQ V +GQ LF +++  Y  AL+ A A +  A+     AE   + N+ L +Q+
Sbjct: 71  ERRLFAEGQNVEKGQDLFTLERTTYELALEDAQATLVGAQTNFDNAERQLQRNRAL-SQR 129

Query: 133 VVSEFSLKTAENSYLTAKAQLAQAEAQEISARNNLSYTEVKSPSDGVVGALPYRAGALVS 192
            VS+  ++ +  +   A+A +  A+ +   A  NL YT +K+P DG +G   Y  G+LVS
Sbjct: 130 TVSQAVIEESHAARDIARASVLSAQTRVNQAELNLGYTHIKAPIDGRIGRAAYSVGSLVS 189

Query: 193 ANIPYPLTTVSDNSDMYVYFSMTENQLLALTRQYG--DMDEALKNMPEVELILNDNSVYQ 250
            +   PL  V     + V FS+++  +L L    G    DE  K    ++L L++   YQ
Sbjct: 190 PS-SEPLARVVQTDPIRVVFSVSDRTILDLRTIAGGAGKDELAKGY-ALKLRLSNGEPYQ 247

Query: 251 KKGTIESISGVIDRQTGTVVARVVFPNESRLLHSGASGTVVVPSIYKNCIAIPQTATVRM 310
           + G +E     ID QTGT+  R +F N   LL  G   TV+V    +    +    +V  
Sbjct: 248 QSGKLEFFGNEIDVQTGTLPIRALFANAQSLLMPGQFVTVIVEPEEREERPVVPVGSVEQ 307

Query: 311 QDKTIVYKVVDGKAVSTLITV-AGINDGREYVVLDGLKAGDEIVSEGAGLVREGTQVK 367
             +     VVDG++ + +  + A +  G+ +VV +GL+ G++++ EG   V  G  V+
Sbjct: 308 DREGRFVLVVDGESRAAVRRIRASVQVGQNWVVEEGLQGGEKLIVEGLQRVSPGAVVE 365