Pairwise Alignments

Query, 604 a.a., beta-galactosidase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 1076 a.a., Beta-galactosidase (RefSeq) from Shewanella loihica PV-4

 Score = 83.6 bits (205), Expect = 4e-20
 Identities = 102/468 (21%), Positives = 191/468 (40%), Gaps = 63/468 (13%)

Query: 52  MERSD-WQNLNGLWNYAVLPLGQSAPTTFD---------GKILVPFAIESSLSGVGKTLG 101
           M+RS  + +LNG W + +     + P  F          G I VP   E+   G G  + 
Sbjct: 66  MDRSQLYLDLNGRWRFHLAKNPDATPKEFAAPEFDASHWGSIQVPGNFETQ--GYGHAIY 123

Query: 102 MEKEL-----W------------YQRAFNIPSSWRGKRVLLHFGAVDWKTEVWVNNIKVG 144
           +++       W            Y++ F +P+ W+ K+V +H GA      ++VN  +VG
Sbjct: 124 LDERYPFDTKWPDAPSDHNPTGLYRKTFTLPAHWQQKQVFIHIGAARSALTLFVNGREVG 183

Query: 145 EHTGGFTPFTFDVTEALEKSTNTLTVKVWDPTDKGFQPRGKQVSNPRGIWYTPVSGIWQT 204
              G  TP  FD+T  L+   N + +++   +D  +      +          ++GI + 
Sbjct: 184 YSQGAKTPAEFDITPYLQAGDNLVAMQLIRWSDASYLESQDMLR---------MTGIERE 234

Query: 205 VWLEPVSEHYIAGIKT----TPDIDTNKIKVKVETDSNRQSDR---LEVKVFD--GKHLV 255
           V+L    +  I  I+       D+   K+ ++V+  S++   R   LE ++ D  GK + 
Sbjct: 235 VYLYATPKQRIEDIQVVTHLNEDLTRAKLAIRVDIASHQPGVRALELEARLLDPQGKPVA 294

Query: 256 AMGTSI----NGLPVEIPMPADAKLWSPDSPFLYQMEVSL-ISAGKLVDQIKSYVAMRKY 310
                +    +  PV        KLW+ + P LY++ ++L    G+ +      + +RK 
Sbjct: 295 KANQRLSLKGDAKPVFSQTLISPKLWNAEMPNLYRLILTLKTEKGETLQVASQQIGVRKI 354

Query: 311 SIKRDEHGIVRLQLNNKDLFQFGPLDQGWWPDGLYTAPTDEALRYDIEKTKDFGFNMIRK 370
           +I   E+G  +L++NNK +   G +D+           + E +  DI   K    N +R 
Sbjct: 355 AI---ENG--QLKVNNKAITIRG-VDRHETDPQTGHVVSRETMELDIRLMKQNNINAVRS 408

Query: 371 HIKVEPARWYTYCDQIGLIVWQDMPSGDKSPEWQNRKYFEGTELTRSAESEETYRKEWKE 430
                   W +  D+ GL V       + + E       + T+L         ++   + 
Sbjct: 409 SHYPNHPYWLSLADRYGLYV-----IDEANIESHPLAIDDKTQLGNEMSWLPAHQARIER 463

Query: 431 VIDCLYSYPCIGTWVPFNEAWGQFKTQEIAEWTKQYDPSRLVNPASGG 478
           +++   ++P +  W   NEA      + + +W K+ DP+R V     G
Sbjct: 464 MVERDKNHPSVIIWSLGNEAGEGKLFERLYQWIKRRDPNRPVQYEPAG 511