Pairwise Alignments

Query, 325 a.a., arabinan endo-1,5-alpha-L-arabinosidase A precursor (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 546 a.a., glycoside hydrolase from Pedobacter sp. GW460-11-11-14-LB5

 Score =  107 bits (268), Expect = 5e-28
 Identities = 94/306 (30%), Positives = 144/306 (47%), Gaps = 51/306 (16%)

Query: 25  TYKNPVVNYSLPDPSVIRAEDGYFYLYATED-IRNLPIHRSKDLIKWESVGTAFTDETRP 83
           TYKNPV+N    DP  IR  D ++ + ++ D I  LPI  SKDL+ W+ +G A   + +P
Sbjct: 40  TYKNPVINADYSDPDAIRVGDDFYMIASSFDAIPGLPILHSKDLVNWKIIGHAL--KRQP 97

Query: 84  TFE-----PKGN-LWAPDINKIGDKYVLYYSMSCWGGEWTCGIGVATADKPEGPFVDHGM 137
            F+       GN +WAP I     ++ +YY       +   GI +  A    G +    +
Sbjct: 98  PFDHFEKTQHGNGVWAPSIRYRNGEFYIYYP------DPDFGIYLTKAKTITGMWSAPKL 151

Query: 138 MFRSNEIGVQNSID--PFYIEDGGR--KYMFWGSFRGIYGI----ELTADGLK-VKSGA- 187
           +     +     ID  PF+ EDG     Y + GS  GI  +     LT DG + +++G  
Sbjct: 152 VAAGKGL-----IDPCPFWDEDGKAYLAYAYAGSRAGIKSVLAIMPLTNDGAQALETGRI 206

Query: 188 --DKKQIAGTAYEGTYIHKKNGYYYLFASTGTCCEGLKSTYQTVVGRSSSLWGPYLDKQG 245
             D  ++  T  EG   +K+NGYYYLFA  G    G+ + +Q ++ RS +++GPY  K  
Sbjct: 207 VYDGHELDPT-IEGPKFYKRNGYYYLFAPAG----GVSTGWQLIL-RSKNIYGPYERK-- 258

Query: 246 RSMLDNNHVVLIHNNKSFVGTGHNAELITDKADNDWILYHGVSVSNPYGRVLLLDRVDWK 305
                    V++   KS V   H    +  +   DW L+      + YGRV+ L  + W 
Sbjct: 259 ---------VVMDQGKSSVNGPHQGAWVNTQTGEDWFLH--FQDKDAYGRVVHLQPMKWI 307

Query: 306 KGWPVV 311
             WPV+
Sbjct: 308 NNWPVI 313