Pairwise Alignments

Query, 325 a.a., arabinan endo-1,5-alpha-L-arabinosidase A precursor (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 326 a.a., arabinan endo-1,5-alpha-L-arabinosidase from Pedobacter sp. GW460-11-11-14-LB5

 Score = 76.3 bits (186), Expect = 1e-18
 Identities = 87/319 (27%), Positives = 134/319 (42%), Gaps = 37/319 (11%)

Query: 3   KLLLIEILLTISFTLMAEDPAKTYK---NPVVN--YSLPDPSVIRAEDGYFYLYATEDIR 57
           K L   +LL       A+D  KT     NP+    Y+ PD ++   +   +++Y T   R
Sbjct: 2   KYLFSSLLLLSGLASFAQD-TKTINQSGNPIFQGWYADPDAAIFNNK---YWVYPTYSAR 57

Query: 58  N-----LPIHRSKDLIKWESVGTAFTDETRPTFEPKGNLWAPDINKIGDKYVLYYSMS-C 111
                 L    S DL+KW+       D     +  K  +WAP I +   KY L++  +  
Sbjct: 58  YKEQVFLDAFSSDDLVKWKK-HPHILDTAAVKWANKA-MWAPAIVQKDKKYYLFFGANDI 115

Query: 112 WGGEWTCGIGVATADKPEGPFVDH-GMMFRSNEIGVQNSIDPFYIED-GGRKYMFWGSFR 169
              +   GIGVA ADKPEGP+ DH G             ID F  +D  G+ Y+ +G ++
Sbjct: 116 QSDKEIGGIGVAVADKPEGPYKDHIGKPLVDKFHNGAQPIDQFVFKDKDGQYYLIYGGWK 175

Query: 170 GIYGIELTAD---GLKVKSGADKKQIAGTAY-EGTYIHKKNGYYYLFASTGTCCEGLKST 225
                +L  D    L  + G   K+I    Y EG Y+  +NG YY   S G         
Sbjct: 176 HCNIAKLNQDFTGFLPFEDGTTFKEITPDNYVEGPYMFIRNGKYYFMWSEG---GWTGPD 232

Query: 226 YQTVVGRSSSLWGPYLDKQGRSMLDNNHVVLIHNNKSFVGTGHNAELITDKADNDWILYH 285
           Y        S +GP+  K+   +L  +  +         G GH++ +I +K    +I+YH
Sbjct: 233 YSVAYAVGDSPFGPF--KRIGKILKQDAAIA-------TGAGHHSVIINEKKGKYYIVYH 283

Query: 286 GVSVSNPYG--RVLLLDRV 302
              ++   G  RV  +D +
Sbjct: 284 RRPLTETDGNHRVTCIDEM 302