Pairwise Alignments

Query, 325 a.a., arabinan endo-1,5-alpha-L-arabinosidase A precursor (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 561 a.a., beta-xylosidase/alpha-L-arabinofuranosidase from Caulobacter crescentus NA1000

 Score = 82.4 bits (202), Expect = 2e-20
 Identities = 88/313 (28%), Positives = 130/313 (41%), Gaps = 42/313 (13%)

Query: 26  YKNPVVNYSLPDPSVIRAEDGYFYLYAT-EDIRNLPIHRSKDLIKWESVGTAFTDETRPT 84
           Y+NPVV    PDPSV RA   ++ + +T      LP+  S DL+ WE +G A        
Sbjct: 48  YRNPVVQGFYPDPSVTRAGKDFYLVNSTFAWFPGLPVFHSTDLVHWEQIGNAIDRPGMLD 107

Query: 85  FEPKG---NLWAPDIN-KIGDKYVLYYSMSCWGGEWTCGIGVATADKPEGPF-------- 132
           F+  G    ++AP I    G  Y+L   + C GG +     + TA  P+GP+        
Sbjct: 108 FKRLGLSRAVFAPAIQAHQGMFYILNTCVDC-GGNY-----LITAKDPKGPWSDPVWLPK 161

Query: 133 ---VDHGMMFRSNEIG-----VQNSIDPFYIEDGGRKYMFWGSFRGIYGIELTADGLKVK 184
              +D  + F   + G     V N   P   E  G + ++   +       +    L + 
Sbjct: 162 VGGIDPSIFFDDEDGGGRVWIVNNDGPPGPPEYPGHRALWIHEYDPKTQTTVGPATLLLD 221

Query: 185 SGADKKQIAGTAYEGTYIHKKNGYYYLFASTGTCCEGLKSTYQTVVGRSSSLWGPYLDKQ 244
            G D         EG +I KK+G+YYL A+ G   EG    +  VV RS S+ GPY+   
Sbjct: 222 KGVD-PATKPIWPEGPHILKKDGWYYLTAAEGGTAEG----HSQVVLRSKSVTGPYVPYT 276

Query: 245 GRSMLDNNHVVLIHNNKSFVGTGHNAELITDKADNDW------ILYHGVSVSNPYGRVLL 298
              +L       +  ++    T      I D  D  W      +  +G  + N  GR   
Sbjct: 277 NNPILTQRD---LPRDRPLPITSAGHADIVDTPDGKWWATFLAVRPYGDDLYNT-GRETF 332

Query: 299 LDRVDWKKGWPVV 311
           L  V+WK GWPV+
Sbjct: 333 LLPVEWKDGWPVI 345