Pairwise Alignments

Query, 1326 a.a., two-component system sensor histidine kinase/response regulator, hybrid ('one-component system') (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 1346 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

 Score =  648 bits (1672), Expect = 0.0
 Identities = 414/1355 (30%), Positives = 668/1355 (49%), Gaps = 90/1355 (6%)

Query: 30   FRSLDINNGLSQNTVHAILQDKQGFMWFGTKDGLDRYDGISFRAFMKES--GTLGNNFIT 87
            F   ++  GLSQN+V  I+QDK+GFMWFGT+ GL+RYDG  F+ +        +  N I 
Sbjct: 21   FDHFNVEKGLSQNSVLTIIQDKEGFMWFGTQYGLNRYDGYRFKIYRNTGLKNAISANEIN 80

Query: 88   SLYEDQQGQIWIGTDVGLYVYSPEHETVERFIMKSDLDTGIDYTVNLVTGDKDGGIWVVT 147
             L+ D++  +W+ T  GL  Y+PE +  E+ ++ S  +    + +  +  D    +W+ +
Sbjct: 81   YLFNDREQNLWVATSNGLNKYNPEKDAFEKIVINSSKNWPGSHVITCIYEDSKSNLWIGS 140

Query: 148  QSQAVFYYNPQTNKLINYLSDQSGRLKFGSLGQLYFDSDNVCWLDIRDGNLYFSKDKLQT 207
             +           K   +L      L    +  +  D     W+    G     K     
Sbjct: 141  INGLTKMIKNPPYKSELFLKSGLNGLASNEIKAISEDDSGKIWVGTTKGLTVIDKINGHY 200

Query: 208  LVPVFPKDGNE-PFKGEYICKLLPGPYNCMYVGTITGLKEV--NLTNKTVRTLLSKDESG 264
                +  DG        YI  ++    + M+VGT +G        TN  V     K+ + 
Sbjct: 201  AFKTYQADGKPGSLADNYITTIVTDKQHRMWVGTQSGGFSTFNKKTNAFVNYNNGKNGAV 260

Query: 265  DDIYVREIAFYSDDELWAGTESGLYIYNLRTKKTVHLRNVSGDPYSISDNAIYSICKDRE 324
            +D  +R++ F +   LW G+  GL I N  T K   +++ + +  S+S N++YS+  D+ 
Sbjct: 261  ND-NIRKMIFDNKGNLWIGSLEGLMIMNPSTGKISSIKHDTENRKSLSQNSVYSLFMDKA 319

Query: 325  GGIWIGSYFGGVNYYPKQYTYFDKVYPRTEIDEMGKRVREFCADHDG--TLWIGTEDKGL 382
              IW+G+YFGGVN      T F+              V     + +G   LWIGTE  GL
Sbjct: 320  NAIWVGTYFGGVNVTYPTTTVFNNFQNGHINPAFSDNVVSSVLEENGGKNLWIGTEGGGL 379

Query: 383  FHYYPSTGLIEPFRHPDIYHNVHGLCL--------DGNYLWVGHFAKGLNRIDLRTHAVK 434
              Y  S+     +++     +  G  L        D N LW+G    GLN +   ++  K
Sbjct: 380  NFYEKSSNKNTLYKNIQNNSSSLGSNLIKVLLKDKDEN-LWIGTHGGGLNYLARGSNVFK 438

Query: 435  HYFDAPND-------IFSICRTTSGNLWLGTTAGLFRYHSETNRFERVPELGWVFIYNIK 487
             +  +  D       I ++     G +W+GT  GL++ +   N F R         YN+K
Sbjct: 439  RFLYSAEDQIATSREIPALAEDKKGIIWVGTQNGLYKSNELKNIFTR---------YNVK 489

Query: 488  ---------------EDKQGNLWLATYIDGVYKRNVRTGEWEHYMHDETNPSSLPSNKVL 532
                            D + NLW+ T  +   K     G+       +   +  P  K +
Sbjct: 490  TASGIIEKPSIKCLLNDAEDNLWMGTTSELYIKPK---GQDRFAPVLQRIKNIRPKIKYI 546

Query: 533  S-IFEDSQNQLWFTTQGGGFCRFDPSGKIFVRYDSSIGLPSNVVHRIEEDEKGLFWITTN 591
            + I +DS+ Q+W  +  GG   +         +    GLPSN +  I ED+    WI+T+
Sbjct: 547  NTIAQDSKKQIWIGSYYGGLYCYRSQNNTLEIFTEENGLPSNNIQAILEDDSHNLWISTS 606

Query: 592  KGLVHFNPKTLEFKVYTIANGLLSNQFNYQSSYKDKNGRIYFGSINGFISFEPSVFVDND 651
             GL  +NP T  FK Y  ++GLL+N FN  +  K  NG +YFG  NG  SF P+    N+
Sbjct: 607  NGLSVYNPGTRHFKNYNTSDGLLNNVFNKNARLKSVNGALYFGGYNGLTSFYPNNIQSNN 666

Query: 652  FLPPVVITDFMLFNKKVPVGSTDSPLKQSITLSDYLELQSNQNSFSFSVAALSYQSPDMN 711
               PVV TD  LFNK +        LK  I  ++ L L  +QN+ +   A L++     N
Sbjct: 667  VASPVVFTDLKLFNKSISADDESGLLKADINFTNKLVLAYDQNTLTIEFALLNFIKSGKN 726

Query: 712  TVLYKLEGYDSEWYSVGKNLITYSNLPYGTYVLKVKAANSDGIWNPDVRTLKIRILPPFY 771
               YKL+GYD  W +V     TY+NLP G+Y   VK  N+DG+++ ++  ++I + PPFY
Sbjct: 727  HFAYKLDGYDKNWNTVSVPAATYTNLPSGSYTFLVKGINNDGVYSANIGRIEIVVNPPFY 786

Query: 772  LSVWAYIIYVILILGALFATFFYFRKRAVEKHQRAMEKFEQEKERELYTSKIEFFTNVAH 831
             + WAY+ Y  +    L     Y   RA+            EKE+E+   K+EFFTN++H
Sbjct: 787  GTWWAYLFYFCVAAAILVIIIRYLLIRAIF-----------EKEKEINEHKLEFFTNISH 835

Query: 832  EIRTPLTLIKSPLESVL-TEKELPENVKMELEIMDQNAERLLNLTNQLLDFRKTENKGFK 890
            EIRTPLTLI  PLE ++ TEK+ PE  +  L+ +  NA+RL+NL  +LLDFRK E+    
Sbjct: 836  EIRTPLTLIVGPLEDLIETEKDNPELYR-SLQPIKNNADRLMNLVTELLDFRKAESGKMP 894

Query: 891  LNPVECSVGSIIRSVYKRFTTLVNQKGIELKVEIPEEELLASVDKEALTKILSNLFTNAL 950
            L+    ++    R ++  F  +   K IE   E  +EE+    DK  L K+  NL +NA 
Sbjct: 895  LHVGSGNIVKFCREIFMAFQNMAISKQIEYNFEADKEEIQLYFDKVQLEKVFFNLLSNAF 954

Query: 951  KYAQTYAYLSLSVDEAGKEFTIVMSNDGKIIPIEMRENIFRPFVQYRDGKDIVPGTGIGL 1010
            K+      ++  ++E+    TI + ++G  IP+  +EN+F  F Q +    I  GTG+GL
Sbjct: 955  KFTPKEGKINFKIEESDHLVTIKICDNGPGIPLAEQENLFERFYQAKSASTI--GTGLGL 1012

Query: 1011 ALARSLAELHQGTLTMDQ--------DMECNRFILSIPIRHQTASDVLEE---EHRE--- 1056
            + ++S+ +LH G +T +          + C +  L     H   SD + +   +H E   
Sbjct: 1013 SFSKSILDLHHGNITFENIPQNADASGLTCFKVSLKTGKSHFKESDFITDAVYDHDEARY 1072

Query: 1057 -----KPVYDEEDNETRIMPSDKDKKEVASVLIVEDNKDMLAFVARQLSPLYHVITAENG 1111
                   V +E   E  ++  ++       VL+VEDN D+ +F+ + L   YH+  +ENG
Sbjct: 1073 GNFLTNAVENESAGENLVLAEEQSYH----VLLVEDNDDVRSFLKKSLQTKYHIHESENG 1128

Query: 1112 IEALKVLEHEYINLVISDIMMPEMDGLELCEHLKSNLDYSHIPIILLTAKTTLESKIEGL 1171
            ++ L+       +++ISD+MMP +DGLELC  LK++   SHIPI+LLTA++    ++ GL
Sbjct: 1129 LKGLEKAFEIIPDIIISDVMMPVLDGLELCRRLKTDERTSHIPIVLLTARSAYVHQVNGL 1188

Query: 1172 EQGADAYIEKPFSVEYLRVNVANLLSNRERLRRRFIESPFIKADTMAQTKADEVFIQKLN 1231
            E GAD+YI KPF+++ L++++ NLL+ RE+++++F     ++   +     ++ F+ K+ 
Sbjct: 1189 ENGADSYIMKPFNLKILQLHIQNLLNAREKVKQKFAGIIQLEPKNLLVNTTEQNFLHKII 1248

Query: 1232 EYVSQHLDNTDLVIDDMAEAMNMGRSNFYRKLKGVLDMSPNEYLRLIRLKKAAQLLKDGR 1291
            + +   + + D  +  ++  + M +   Y+K++ + D+S NE+++ IRLK+AAQLLK   
Sbjct: 1249 QIIETKMTDPDFDVPMLSSEIGMSQPTLYKKIRALTDLSVNEFIKSIRLKRAAQLLKQKI 1308

Query: 1292 YGIVEISYMVGFNSPSYFSNCFKKQFGVLPKDFMQ 1326
              I +++Y VG+    YFS  FKK FG  P +F+Q
Sbjct: 1309 GNISDVAYAVGYTDRKYFSIEFKKYFGKSPTEFIQ 1343