Pairwise Alignments

Query, 1326 a.a., two-component system sensor histidine kinase/response regulator, hybrid ('one-component system') (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 1365 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

 Score =  642 bits (1655), Expect = 0.0
 Identities = 417/1371 (30%), Positives = 678/1371 (49%), Gaps = 68/1371 (4%)

Query: 7    LSILIVFIFHTFYVFADL--NEGYAFRSLDINNGLSQNTVHAILQDKQGFMWFGTKDGLD 64
            L ++ ++ F   ++   L   +   F  L + NGLSQN+V AI QDK  F+W GT+ GL+
Sbjct: 3    LRLIALWFFPMLFICTTLCAQKHLVFNHLRMENGLSQNSVMAITQDKNQFIWMGTRHGLN 62

Query: 65   RYDGISFRAFMKES---GTLGNNFITSLYEDQQGQIWIGTDVGLYVYSPEHETVERFIMK 121
            RYDG  F+ +   S    +L +N I +L  D +G++W+GT+ GL +Y+ +++   R   +
Sbjct: 63   RYDGYRFKIYNNSSDNLNSLSDNVINTLLSDSKGRLWVGTENGLNIYNDKNDHFYRINKR 122

Query: 122  SDLDTGIDYTVNLVTGDKDGGIWVVTQSQAVFYYNPQTNKLINYLSDQSG-RLKFGSLGQ 180
            S  ++    +V  +  D    IWV T +      + +      +L D+   +     +  
Sbjct: 123  SSANSFSCDSVECIYEDPQKNIWVGTYNGLNLVIDTEKQIFKKFLFDKPNYKSALNCIFS 182

Query: 181  LYFDSDNVCWLDIRDG--NLYFSKDKLQTLVPVFPKDGNEPFKGEYICKLLPGPYNCMYV 238
            ++ D     W+   +G   +Y  K K    +     +         +  ++      +++
Sbjct: 183  IFKDEKQNLWVGTYNGLVRIYQVKGKYHFEIFRHNPNNKNSISSNAVKSIVIDKQKRLWL 242

Query: 239  GTITGLKEVNLTNKTVRTLLSKDESGDDIYVREIAFYSDDE---LWAGTESGLYIYNLRT 295
            GT  GL   +  +KT +   +     + I   +I   + D+   +W GT+ GL I +  T
Sbjct: 243  GTYNGLNLFDYEHKTFKRYQTSATDPNSIINNDIRKLTRDKVGNIWIGTQEGLSILDPNT 302

Query: 296  KKTVHLRNVSGDPYSISDNAIYSICKDREGGIWIGSYFGGVNY-YPKQYTYFDKVYPRTE 354
            +K  + R     P  +S N+I+SI +D  G +++G+Y+ G N  YP    +      +T 
Sbjct: 303  RKFSNYRYDPEQPDGLSQNSIHSIFQDLNGSVYLGTYYKGANVVYPSATPFTVFRNSKTR 362

Query: 355  IDEMGKRVREFCADHDGTLWIGTEDKGL---------FHYYPSTGLIEPFRHPDIYHN-V 404
                   V     D +  LWIGTE  GL         F YY     +EP  +  +  N +
Sbjct: 363  QGLSSDIVSAMVEDQNHNLWIGTEGGGLNYVNRSNHTFTYYK----LEPNSNNGLNSNLI 418

Query: 405  HGLCLDGN-YLWVGHFAKGLNRIDLRTHAVKHYFDAPN--------DIFSICRTTSGNLW 455
              LCLD    L VG    GL   +   H  K   +  N        ++ +I   + G +W
Sbjct: 419  KTLCLDKTGQLLVGTHRGGLYLFNAAGHNFKKIINVKNKKNNPGGSEVIAITEDSDGTVW 478

Query: 456  LGTTAGLFR-------YHSETNRFERVPELGWVFIYNIKEDKQGNLWLATYIDGVYKRNV 508
            +G+  GL         Y + T +      L   +I  I EDK  NLW+ T + G+Y  + 
Sbjct: 479  VGSRDGLSTLKKTNGLYAATTVKSPLEQNLRNKYIQVIFEDKAKNLWIGT-MAGLYAYHP 537

Query: 509  RTGEWEHYMHDETNPSSLPSNKVLSIFEDSQNQLWFTTQGGGFCRFDPSGKIFVRYDSSI 568
             T     Y  ++T P SL S+ +  I +     +   T  GG   FD   + F  Y+   
Sbjct: 538  ATKRITAYYKNKTKPGSLNSDHINCIVQIQNGNICVGTSFGGLSIFDNKSRKFKNYNEKD 597

Query: 569  GLPSNVVHRIEEDEKGLFWITTNKGLVHFNPKTLEFKVYTIANGLLSNQFNYQSSYKDKN 628
            GLP++ V  I EDE+   WI+T+KGL     KT  F  YT ++GL  N FN +S  KD  
Sbjct: 598  GLPNSNVLGIIEDEENNLWISTDKGLSKLITKTGRFINYTKSDGLAGNDFNIRSFLKDSR 657

Query: 629  GRIYFGSINGFISFEPSVFV--DNDFLPPVVITDFMLFNKKVPVGSTDSPLKQSITLSDY 686
            G ++FG  +G  +F PS      N  + P+  T+  LF+K V V + D  L + I     
Sbjct: 658  GELFFGGYDGLTAFYPSQIDINSNRNVAPITFTELKLFDKPVAVNAPDGLLNEDIKSIKQ 717

Query: 687  LELQSNQNSFSFSVAALSYQSPDMNTVLYKLEGYDSEWYSVGKNLITYSNLPYGTYVLKV 746
            +  + + N+FS   A L+Y  P+ N+  Y L+G+  +W       +TYS+LP G Y   V
Sbjct: 718  ITFKHDNNNFSLDFALLNYIKPEKNSYRYILKGHSKDWVKTDVPSVTYSDLPAGNYTFIV 777

Query: 747  KAANSDGIWNPDVRTLKIRILPPFYLSVWAYIIYVILILGALFATFFYFRKRAVEKHQRA 806
               N+DG       +LKI +LPPF+ + WAY+IY+    G LF    Y   RA+ K    
Sbjct: 778  TGNNNDGNPGNKPASLKITVLPPFWATWWAYLIYLACFSGLLFLIVRYLFVRALLKRTED 837

Query: 807  MEKFEQEKERELYTSKIEFFTNVAHEIRTPLTLIKSPLESVLTEKELPENVKMELEIMDQ 866
            ++K            K+ FFT VAHEIRTPLTLI  PLE++  + +    +  ++  +  
Sbjct: 838  IQKM-----------KLNFFTYVAHEIRTPLTLILGPLENLSKQYQTDTELNRQIIPIKN 886

Query: 867  NAERLLNLTNQLLDFRKTENKGFKLNPVECSVGSIIRSVYKRFTTLVNQKGIELKVEIPE 926
            NA RL+ L  +L+DFRK E     L+  E ++   I  ++  F+ L     I+ +    +
Sbjct: 887  NANRLMRLITELMDFRKAETGHLTLHVTEDNIVDFINEIFISFSHLAQTNDIQYEFVRGQ 946

Query: 927  EELLASVDKEALTKILSNLFTNALKYAQTYAYLSLSVDEAGKEFTIVMSNDGKIIPIEMR 986
            E +    DK  L K+L NL +NA K+      +S+++ +   E  I ++++G  IP E  
Sbjct: 947  ENISLFFDKRQLEKVLFNLLSNAFKFCDKGGKISVTLVDMDNEVAISIADNGLGIPAESL 1006

Query: 987  ENIFRPFVQYRDGKDIVPGTGIGLALARSLAELHQGTLTMDQDMECN--RFILSIPIRHQ 1044
            +N+F  + Q  +      G+GIGLAL++++ E H+G + ++     N  R   +  +R +
Sbjct: 1007 KNLFSDYFQVDEQHSNQIGSGIGLALSKAIVEEHKGHIAVESTPAENGERGFTNFTVRLK 1066

Query: 1045 TAS--------DVLEEEHREKPVYDEE-DNETRIMPSDKDKK-EVASVLIVEDNKDMLAF 1094
                       D  ++      +Y ++ + E  I+  +K+      ++L+VEDN ++   
Sbjct: 1067 KGKSHFKTAIFDGAKDYPTHPNIYTQQPEKELNILKPEKETDLSTETILVVEDNSEIRQL 1126

Query: 1095 VARQLSPLYHVITAENGIEALKVLEHEYINLVISDIMMPEMDGLELCEHLKSNLDYSHIP 1154
            +A  +   Y V  +ENG+   +       +L+I DIMMP MDG+ELC  LK +   SHIP
Sbjct: 1127 IASLIGGHYLVAESENGLMGWETAVETLPDLIICDIMMPIMDGIELCRRLKEDERTSHIP 1186

Query: 1155 IILLTAKTTLESKIEGLEQGADAYIEKPFSVEYLRVNVANLLSNRERLRRRFIESPFIKA 1214
            +I+LTA+++   ++ GLE GADAYI KPFS E L +NV NLL +R+ +R++F++   ++ 
Sbjct: 1187 VIILTARSSHIHQVSGLETGADAYITKPFSPELLLLNVRNLLMSRQVMRQKFLKHIHLQP 1246

Query: 1215 DTMAQTKADEVFIQKLNEYVSQHLDNTDLVIDDMAEAMNMGRSNFYRKLKGVLDMSPNEY 1274
              +     DE F+ KL +Y+ +H+ + D  + ++A  + M R   Y+K++ + ++S N++
Sbjct: 1247 KELTINAIDEAFMLKLLKYIDEHITDEDFGVSELASMVGMSRPVLYKKIRNLTNLSVNDF 1306

Query: 1275 LRLIRLKKAAQLLKDGRYGIVEISYMVGFNSPSYFSNCFKKQFGVLPKDFM 1325
            ++ IRLKKA +L K  R+ I E++Y VGFN P YFS  FKKQFG  P+ FM
Sbjct: 1307 VKSIRLKKAMELFKQNRFTIYEVAYQVGFNDPKYFSREFKKQFGKSPRAFM 1357