Pairwise Alignments

Query, 1326 a.a., two-component system sensor histidine kinase/response regulator, hybrid ('one-component system') (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 1349 a.a., hybrid sensor histidine kinase/response regulator from Pedobacter sp. GW460-11-11-14-LB5

 Score =  661 bits (1706), Expect = 0.0
 Identities = 416/1348 (30%), Positives = 685/1348 (50%), Gaps = 60/1348 (4%)

Query: 29   AFRSLDINNGLSQNTVHAILQDKQGFMWFGTKDGLDRYDGISFRAFMKESGTLGN----N 84
            +F  L +NNGLSQ+TV +I +D +G+MWFGT+D L+RYDG S + +  +     +    +
Sbjct: 9    SFDHLSVNNGLSQSTVLSICKDSRGYMWFGTRDCLNRYDGKSVKIYRTDPDNPASISTED 68

Query: 85   FITSLYEDQQGQIWIGTDVGLYVYSPEHETVERFIMKSDLDTGI-DYTVNLVTGDKDGGI 143
            +I +L ED+Q  +WIGT  GL  Y PE +  ER          I D  +  +  D+ G +
Sbjct: 69   YIYALEEDRQKNLWIGTQNGLNRYIPEKDAFERIAFDPKNANSISDKIILSIYADRSGKV 128

Query: 144  WVVTQSQAVFYYNPQTNKLINYLSDQSGRLKFGSLGQLYFDSDNVCWLDIRDGNLYFSKD 203
            W  T        N  + K       Q   L   S+  ++ DS    W+    G    S  
Sbjct: 129  WFGTNQGLSMLENGSSRKFKKIY--QKDGLAGNSVYTIFEDSKGNIWVGTTTGLSRLSFK 186

Query: 204  KLQTLVPVFPKDGNEP--FKGEYICKLLPGPYNCMYVGTITG-----LKEVNLTNKTVRT 256
            + +  +  F     +P    G  I  +       +++G+ +      L + +   +   +
Sbjct: 187  EGKYHIQSFYHRAGDPGSISGNSIRTIAEDGKGRIWIGSESEGLNLFLPQSHSFKRFRYS 246

Query: 257  LLSKDESGDDIYVREIAFYSDDELWAGTESGLYIYNLRTKKTVHLRNVSGDPYSISDNAI 316
             L  +   +DI VR+I       LW  T +GL I + +T      ++ + +  S+SDN+I
Sbjct: 247  ALQPNALSNDI-VRKIMPDGKGNLWIATMNGLNILDTQTLGFTSYKHDADNRKSLSDNSI 305

Query: 317  YSICKDREGGIWIGSYFGGVNYYPKQ---YTYFDKVYPRTEIDEMGKRVREFCADHDGTL 373
              I +D +G IWIG+ FGGVN   +    +T F     R  I      V    AD+D  L
Sbjct: 306  KEIFQDDQGSIWIGTMFGGVNVAHRNTIPFTVFKYSKYRNSISSDISSV--IAADNDQNL 363

Query: 374  WIGTEDKGLFHYYPSTGLIEPF----RHPDIYHN--VHGLCLDGN-YLWVGHFAKGLNRI 426
            WIGTE +GL  Y   TGL + +    R P    N  +  +  D    +W+G +  GL   
Sbjct: 364  WIGTEGQGLNFYNVKTGLFKKYINDPRDPGSLSNNTIKAIFNDRKGRIWIGLYQGGLELF 423

Query: 427  DLRTHAVKHYFDAPNDIF-----SICRTTSGNLWLGTTA-GLFRYHSETNRFERVPE--- 477
               T   KHY    N +      SI     G L LGT++ GL  +  E   F+ + +   
Sbjct: 424  IPSTGKFKHYPPGRNGLSQGYLSSISEDDQGRLLLGTSSKGLNIFDPEKESFQLIDDQPG 483

Query: 478  ----LGWVFIYNIKEDKQGNLWLATYIDGVYKRNVRTGEWEHYMHDETNPSSLPSNKVLS 533
                L   +I    +D + NLW+ T   G+         +  +  D+    SL S+++  
Sbjct: 484  HGLKLSSSYIRFAYQDTKKNLWVGTP-RGLNFLPPGANHFSVFSRDDKTKGSLKSSQITC 542

Query: 534  IFEDSQNQLWFTTQGGGFCRFDPSGKIFVRYDSSIGLPSNVVHRIEEDEKGLFWITTNKG 593
            ++ED    +W  T  GG   + P  K F  Y  + GL S+ +  + +D  G  WI+T++G
Sbjct: 543  LWEDRLGHIWVGTMRGGLSLYHPDSKSFSTYTRAQGLASDNIIDVLDDNDGNLWISTDRG 602

Query: 594  LVHFNPKTLEFKVYTIANGLLSNQFNYQSSYKDKNGRIYFGSINGFISFEPSVFVDNDFL 653
            L  F+ K   FK Y   +GL +N+FN  S+Y+D +G++YFGS +G + F P    +N  +
Sbjct: 603  LSKFDYKRGVFKNYNTGDGLPTNEFNVNSAYRDIHGKLYFGSYDGLVVFTPREITENTLI 662

Query: 654  PPVVITDFMLFNKKVPVGSTDSPLKQSITLSDYLELQSNQNSFSFSVAALSYQSPDMNTV 713
            P  V +   LFNK V +   +  LKQ I+ +  +   + QN FS    +L+Y  P  N  
Sbjct: 663  PRTVFSGLKLFNKPVGINEDNGLLKQDISFTKGITFTAEQNIFSLEFVSLNYVQPQRNRY 722

Query: 714  LYKLEGYDSEWYSVGKNLITYSNLPYGTYVLKVKAANSDGIWNPDVRTLKIRILPPFYLS 773
             YKLEG++ +W  V     +Y+NLP G Y L VK +N+DG+W+     ++IR+LPP + +
Sbjct: 723  AYKLEGFEKDWNYVTIPSASYTNLPSGNYKLLVKGSNNDGLWSKAPVVMEIRVLPPLWQT 782

Query: 774  VWAYIIYVILILGALFATFFYFRKRAVEKHQRAMEKFEQEKERELYTSKIEFFTNVAHEI 833
             WAY +Y I     L+    + R++   K +   E    E++ ELY  K++FFT ++HEI
Sbjct: 783  WWAYTLYFIAGGLLLYFVLRFTRRQQKLKTELYYEHLNSERQSELYQMKLDFFTRISHEI 842

Query: 834  RTPLTLIKSPLESVLTEKELPENVKMELEIMDQNAERLLNLTNQLLDFRKTENKGFKLNP 893
            RTPLTLI +PLE ++        V ++L+ + +N +RL+ L ++LLDFRK E+    L  
Sbjct: 843  RTPLTLIFAPLEKLIKITAENGAVNLQLQNIKRNTDRLVRLISELLDFRKIESGNLSLKV 902

Query: 894  VECSVGSIIRSVYKRFTTLVNQKGIELKVEIPEEELLASVDKEALTKILSNLFTNALKYA 953
             E  + S  R +Y+ +  L   K I+ + E   E +L   D   + K+  N+ +NA K+ 
Sbjct: 903  SENDLVSFCRQIYESYLGLAEIKNIDYRFECEAESMLVYYDPAQMEKVFYNILSNAFKFT 962

Query: 954  QTYAYLSLSVDEAGKEFTIVMSNDGKIIPIEMRENIFRPFVQYRDGKDIVPGTGIGLALA 1013
                 ++ S+ ++     I +++ G  IP ++++ IF  F Q ++G     G GIGLALA
Sbjct: 963  PDNGKITFSLKQSDGLAKIAITDTGIGIPADLQDKIFTNFFQVKNGAAATEGWGIGLALA 1022

Query: 1014 RSLAELHQGTLTMDQDMECNRFILSIPIRHQT----ASDVLEEEHREKPVYDEE------ 1063
            +++ +LH+G + +  +   N     I I H +     +   +E+    P+  ++      
Sbjct: 1023 KNILDLHKGEVNVYSE-PANNKRQGITILHVSLLLGKNHFSDEQIASNPIVTDKPVAVGS 1081

Query: 1064 -DNETR----IMPSDKDKKEVASVLIVEDNKDMLAFVARQLSPLYHVITAENGIEALKVL 1118
             D+E      + P DK +    +VL+VEDN ++  F+ + L   YH++  +NG+   +V 
Sbjct: 1082 LDHELAKIQLVAPEDKKRH---TVLVVEDNDELRDFIVQSLKHTYHILEGKNGLVGWEVA 1138

Query: 1119 EHEYINLVISDIMMPEMDGLELCEHLKSNLDYSHIPIILLTAKTTLESKIEGLEQGADAY 1178
                 ++V+SD+ MPE++G ELC+ LK     +HIP+I+LTA  +   +I+GLE GAD Y
Sbjct: 1139 TEHVPDIVVSDVTMPELNGFELCQRLKQEETTNHIPVIMLTAMASHVHQIDGLEAGADVY 1198

Query: 1179 IEKPFSVEYLRVNVANLLSNRERLRRRFIESPFIKADTMAQTKADEVFIQKLNEYVSQHL 1238
            I KPFS++ L +++ NLL  RE LR+++I+   +    +     +E F+ +L + +   +
Sbjct: 1199 ITKPFSIQVLELSIRNLLQGREELRQKYIKQIMLNPRKLETASPEEKFLNRLMQLIEDGM 1258

Query: 1239 DNTDLVIDDMAEAMNMGRSNFYRKLKGVLDMSPNEYLRLIRLKKAAQLLKDGRYGIVEIS 1298
            ++ +  +  + + + M ++  Y+K+K +  +S +++++  RLK+AAQLL D +  I E++
Sbjct: 1259 EDPEFNVGGLVDQIGMSQTVLYKKIKALTGLSISDFIKSQRLKRAAQLLNDHKMNIAEVA 1318

Query: 1299 YMVGFNSPSYFSNCFKKQFGVLPKDFMQ 1326
            Y VGFN   YFS  F+KQFGV P ++ Q
Sbjct: 1319 YSVGFNDRKYFSKEFRKQFGVAPSEYQQ 1346