Pairwise Alignments
Query, 1326 a.a., two-component system sensor histidine kinase/response regulator, hybrid ('one-component system') (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482
Subject, 1347 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5
Score = 583 bits (1503), Expect = e-170
Identities = 399/1343 (29%), Positives = 666/1343 (49%), Gaps = 94/1343 (6%)
Query: 33 LDINNGLSQNTVHAILQDKQGFMWFGTKDGLDRYDGISFRAFMKESG---TLGNNFITSL 89
L + +GLS N V+++ D GFMW GT DGL+RYDG F+ F G +L NN IT L
Sbjct: 34 LGVESGLSNNVVNSLYLDHFGFMWMGTYDGLNRYDGYHFKVFRNGWGDEHSLVNNHITVL 93
Query: 90 YEDQQGQIWIGTDVGLYVYSPEHETVERFIMKSDLDTG----IDYTVNLVTGDKDGGIWV 145
D + ++W+GT G+ Y + I LD G + Y +N + + ++V
Sbjct: 94 NGDAKNRVWVGTQKGISYYDYADSRFHQLIY---LDKGRKNEVSYAINSIAISQALAVYV 150
Query: 146 VTQSQAVFYYNPQTNKLINYLSDQSGRLKFG-----SLGQLYFDSDNVCWLDIRD-GNLY 199
T+ + +F ++ S + R+ FG ++ LY D D WL I+D G
Sbjct: 151 ATEEKGLF--------MLKKNSSLAERIPFGKNFDFTVKALYIDDDQTLWLFIKDVGLCK 202
Query: 200 FSKDKLQTLVPVFPKDGNEPFKGEYICKLLPGPYNCMYVGTITGLKEVNLTNKTVRTLLS 259
+ KD+ + + + + +++GT GL + + V+ +S
Sbjct: 203 YDKDQNKVRLVTAALSS--------VTCITKDTKQTLWLGTERGLFQFD----KVKASIS 250
Query: 260 K-DESGDDIYVREIAFYSDDELWAGTESG-LYIYNLRTKKTVHLRNVSGDPYSISDNAIY 317
K ++ ++ + + +LW T+ G + +Y+ + +KT +L + + +S N++
Sbjct: 251 KFNQHLNNENIMGLLLDRQQKLWISTDGGGVAVYDTKKQKTSYL-SAGKEKGLLSSNSVA 309
Query: 318 SICKDREGGIWIGSYFGGVNYYPKQYTYFDKVY--PRTEIDEMGKRVREFCADHDGTLWI 375
+ +D E WI + GGVN + F + P + V F D + +WI
Sbjct: 310 QVYEDHESRKWIATLRGGVNIIDTENEQFTTIKHDPLKSNSLINNFVLSFSEDENKNIWI 369
Query: 376 GTEDKGLFHYYPSTGLIEPFRHPDIYHN-----VHGLCLDGNY-LWVGHFAKGLNRIDLR 429
GT+ GL + + ++ V + D ++ +WV F+ G++R +
Sbjct: 370 GTDGGGLSVWNRKLNTFANYAKTSDPNSLTSNFVTSILNDADHNVWVASFSGGIDRFNKT 429
Query: 430 THAVKHY--------FDAPNDIFSICRTTSGNLWLGTTAG--LFRYHSETNRFERVPELG 479
T HY D N I+ + + N+W+GTT G L+RY+ ++FE +
Sbjct: 430 TGKFVHYNCYNTSKGVDDIN-IWKLYQDKQQNIWVGTTKGGALYRYNKSIDKFELF-DTK 487
Query: 480 WVFIYNIKEDKQGNLWLATY-----IDGVYKRNVRTGEWEHYMHDETNPSSLPSNKVLSI 534
I+++ +D +G LW Y ID V K+ H+ T + + +I
Sbjct: 488 LKDIHSLFQDSKGRLWAGNYTELIEIDPVNKK-----------HNYTKINFA----IRAI 532
Query: 535 FEDSQNQLWFTTQGGGFCRFDPSGKIFVRYDSSIGLPSNVVHRIEEDEKGLFWITTNKGL 594
ED +Q+W T+GGG FDP K RY S GLPSN V I +D +G W +T GL
Sbjct: 533 QEDFNHQIWIGTEGGGLLLFDPETKKIKRYIQSDGLPSNSVLNILQDAQGNLWCSTYNGL 592
Query: 595 VHFNPKTLEFKVYTIANGLLSNQFNYQSSYKDKNGRIYFGSINGFISFEPSVFVDNDFLP 654
F+ + FK Y +GL SNQFNY ++ K NG FG I GF F P N +P
Sbjct: 593 SRFDVRHHSFKNYYATDGLQSNQFNYNAALKLANGNFLFGGIGGFNLFSPDSIKKNKRIP 652
Query: 655 PVVITDFMLFNKKVPVGSTDSPLKQSITLSDYLELQSNQNSFSFSVAALSYQSPDMNTVL 714
+V+TDF + N +P+ + S+ +E+ + S AA+ + D +
Sbjct: 653 KMVLTDFRINN--IPLDQDSAYNDISVINLARIEIPFSDAVISIDYAAIEFSFQDQISYA 710
Query: 715 YKLEGYDSEWYSVGK-NLITYSNLPYGTYVLKVKAANSDGIWNPDVRTLKIRILPPFYLS 773
Y LEG+D +W V K + YS L G Y L +K+ +++G W+ + + + IRILPP+Y +
Sbjct: 711 YYLEGWDRDWNYVNKLSTAYYSRLNEGEYKLHIKSTDTEGAWSNNEKIVVIRILPPWYRT 770
Query: 774 VWAYIIYVILILGALFATFFYFRKRAVE-KHQRAMEKFEQEKERELYTSKIEFFTNVAHE 832
WAY IY+I I ++F F +R R KH+ + + E+E++L K+ FFTN++HE
Sbjct: 771 WWAYTIYLI-IGSSIFYLFQTYRNRQRRLKHEVEITNLKMEREKDLNEKKLNFFTNISHE 829
Query: 833 IRTPLTLIKSPLESVLTEKELPENVKMELEIMDQNAERLLNLTNQLLDFRKTENKGFKLN 892
+RTPLTLI +P++ ++ +K+ P K +L I+ +N+ RLL+L +QLL FRKTE++ L
Sbjct: 830 LRTPLTLIVNPIKDIILKKD-PGPEKNDLNIVYRNSRRLLSLVDQLLLFRKTESENDTLK 888
Query: 893 PVECSVGSIIRSVYKRFTTLVNQKGIELKVEIPEEELLASVDKEALTKILSNLFTNALKY 952
V ++ ++ F L Q I+ E EEEL DK+ L + NL +NALK+
Sbjct: 889 IVRINLYKFTNEIFLCFNYLAKQNHIDYTFECEEEELDIYADKDKLEIVFFNLLSNALKF 948
Query: 953 AQTYAYLSLSVDEAGKEFTIVMSNDGKIIPIEMRENIFRPFVQYRDGKDIVPGTGIGLAL 1012
++ SV G I +S+ G IP + E +F F + + + G GIGL L
Sbjct: 949 TPKGGFVKFSVKPLGMRVQIEVSDSGPGIPAHVGEKLFDKFYKVMSNESLKMGFGIGLYL 1008
Query: 1013 ARSLAELHQGTLTMDQDMECNR-FILSIPIRHQTA--SDVLEEE--HREKPVYDEEDNET 1067
A++ ELH+G ++ + F++ IP+ S V + E + + + EE+ E
Sbjct: 1009 AKNFVELHKGKISFRSNQGMGTIFLIDIPVGEPNLQHSGVFQNELTYVNELIAQEEEAEN 1068
Query: 1068 RIMPSDKDKK----EVASVLIVEDNKDMLAFVARQLSPLYHVITAENGIEALKVLEHEYI 1123
+ + ++ S+L+++DN +++ ++ + + AENG + LK +
Sbjct: 1069 NDTEHVGNLQLLISDLHSILVIDDNPEIIDYIRHIFQENFKIYKAENGTDGLKRCKEYLP 1128
Query: 1124 NLVISDIMMPEMDGLELCEHLKSNLDYSHIPIILLTAKTTLESKIEGLEQGADAYIEKPF 1183
++VISD+ M ++G+ELC+ +K + SHIP+ILLT + E K++G+E GA +I KPF
Sbjct: 1129 DIVISDVNMDGLNGIELCKAIKDDSALSHIPVILLTGDPSPEVKLKGIEVGAYDFISKPF 1188
Query: 1184 SVEYLRVNVANLLSNRERLRRRFIESPFIKADTMAQTKADEVFIQKLNEYVSQHLDNTDL 1243
E + +++ NR L+ F +K+D ++ D+ F+QK + ++L
Sbjct: 1189 DRELFTAKINSIIKNRTNLQSYFYNEITLKSDAHKVSQEDKGFLQKCIMIIEENLMEDSF 1248
Query: 1244 VIDDMAEAMNMGRSNFYRKLKGVLDMSPNEYLRLIRLKKAAQLLKDGRYGIVEISYMVGF 1303
+ +A + M SN Y+++K S N ++R IRL+KAA+LL + I E ++ VG
Sbjct: 1249 NVKILASDLGMSHSNLYKRIKATSGQSVNGFIRFIRLRKAAELLINTNLNINEAAFRVGI 1308
Query: 1304 NSPSYFSNCFKKQFGVLPKDFMQ 1326
N YF F+K F + P +F++
Sbjct: 1309 NDSKYFREQFQKLFKLTPSEFIK 1331
Score = 53.1 bits (126), Expect = 2e-10
Identities = 42/169 (24%), Positives = 74/169 (43%), Gaps = 15/169 (8%)
Query: 30 FRSLDINNGLSQNTVHAILQDKQGFMWFGTKDG--LDRYDGISFRAFMKESGTLGNNFIT 87
+ + + G+ + + QDKQ +W GT G L RY+ S F L + I
Sbjct: 436 YNCYNTSKGVDDINIWKLYQDKQQNIWVGTTKGGALYRYNK-SIDKFELFDTKLKD--IH 492
Query: 88 SLYEDQQGQIWIGTDVGLYVYSPEHETVERFIMKSDLDTGIDYTVNLVTGDKDGGIWVVT 147
SL++D +G++W G L P + K T I++ + + D + IW+ T
Sbjct: 493 SLFQDSKGRLWAGNYTELIEIDP--------VNKKHNYTKINFAIRAIQEDFNHQIWIGT 544
Query: 148 QSQAVFYYNPQTNKLINYLSDQSGRLKFGSLGQLYFDSDNVCWLDIRDG 196
+ + ++P+T K+ Y+ QS L S+ + D+ W +G
Sbjct: 545 EGGGLLLFDPETKKIKRYI--QSDGLPSNSVLNILQDAQGNLWCSTYNG 591