Pairwise Alignments

Query, 1326 a.a., two-component system sensor histidine kinase/response regulator, hybrid ('one-component system') (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 1347 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

 Score =  572 bits (1474), Expect = e-167
 Identities = 403/1364 (29%), Positives = 663/1364 (48%), Gaps = 74/1364 (5%)

Query: 7    LSILIVFIFHTFYVFADLNEGYAFRSLDINNGLSQNTVHAILQDKQGFMWFGTKDGLDRY 66
            L  LI+ I      F DL+    F  L I  GLS N+V+AI +D  GFMWFGT DGL++Y
Sbjct: 8    LFFLIILIIR----FTDLHAQDLFSHLGIEKGLSNNSVNAIYKDHFGFMWFGTDDGLNQY 63

Query: 67   DGISFRAFMK---ESGTLGNNFITSLYEDQQGQIWIGTDVGLYVYSPEHETVERFIMKSD 123
            +G SFR +     +S +L NN +  + ED  G +WI T  G+ V         + I K+ 
Sbjct: 64   NGYSFRIYRNNPNDSSSLVNNQVIGMAEDGSGTLWIATKRGVSVLHSFPSKFVKPIFKAY 123

Query: 124  LDTG---IDYTVNLVTGDKDGGIWVVTQSQAVFYYNPQTNKLINYLSDQSGR--LKFGSL 178
             D     ID  +  + G   G +++      +  Y+  + +    +S Q G   L   S+
Sbjct: 124  NDKKARPIDQEIYAIKGGNHGDVFIGASDLGLLVYDNHSRET-RQVSFQPGEKVLTPYSI 182

Query: 179  GQLYFDSDNVCWLDIRDGNLYFS-KDKLQTLVPVFPKDGNEPFKGEYICKLLPGPYNCMY 237
              +    D    ++   G  Y+  + K  +LV       N   +      +       ++
Sbjct: 183  RAIRPVQDRAWLINPAKGLAYYDYRSKQISLV-----SSNGDIRNAN--SIEADQSGNLW 235

Query: 238  VGTITGLKEVNLTNKTVRTLLSKDESGDDIYVREIAFYSDDELWAGTESGLYIYNLRTKK 297
            +GT  GL   N+  K+ +             +  +AF   + L   T+ G        K+
Sbjct: 236  IGTDHGLYRYNILAKSFKWYSVAPGQLLAQRILSLAFDRRNRLLIATDGGGINIMDTEKE 295

Query: 298  TVHLRNVSGDPYSISDNAIYSICKDREGGIWIGSYFGGVNYYPKQYTYFDKVY--PRTEI 355
            +   +     P S++ NAI  I KD E  IW+G+  GG+N   ++   F  +Y  P ++ 
Sbjct: 296  SFSYQTAGESPSSLNSNAISVILKDEEHRIWVGTLRGGINVLDRKRNEFKHIYRNPLSQQ 355

Query: 356  DEMGKRVREFCADHDGTLWIGTEDKGLFHYYPSTGLIEPFRHPD------IYHNVHGLCL 409
              +   +  FC D DG +WIGT+  G+  +    G  + +RH +        +NV  +  
Sbjct: 356  SLVSDFILSFCEDRDGKIWIGTDGGGISLWDRLKGF-KTYRHENGNPQSLSSNNVTSIVR 414

Query: 410  DGN-YLWVGHFAKGLNRIDLRTHAVKHY-----FDAPNDIFSICRTTSGNLWLGTTAG-- 461
              N  +W+  F  G+NR +  +   K+Y     +    +++ +     G +W GT  G  
Sbjct: 415  SNNDVIWIATFGGGINRYNRGSGTFKYYPCANSWGKDENVWKLFIDKKGGIWAGTCVGVG 474

Query: 462  -LFRYHSETNRFERVPELGWVFIYNIKEDKQGNLWLATYIDGVYKRNVRTGEWEHYMHDE 520
             L+ Y+  ++RFE         I  I EDK GNLW  ++ + +YK    T   +   +D 
Sbjct: 475  LLYHYNVASDRFEPFNNEHLKNIIAINEDKLGNLWFGSF-NKLYKY---TAGGKVITYDI 530

Query: 521  TNPSSLPSNKVLSIFEDSQNQLWFTTQGGGFCRFDPSGKIFVRYDSSIGLPSNVVHRIEE 580
              P       + SIF +    L+  TQ  G  +++     F  +  S GL +N V  IEE
Sbjct: 531  RYP-------IRSIFFNKSGDLFVGTQYAGLLKYNSKNGSFQAFTESDGLSNNTVLNIEE 583

Query: 581  DEKGLFWITTNKGLVHFNPKTLEFKVYTIANGLLSNQFNYQSSYKDKNGRIYFGSINGFI 640
            D+    W++T  GL  FN +   F  + I NGL  N+FNY +S   ++G++ FG I GF 
Sbjct: 584  DDHANLWLSTFNGLTKFNYRNNTFNKFYIENGLQCNEFNYNASAHLRSGQLLFGGIKGFN 643

Query: 641  SFEPSVFVDNDFLPPVVITDFMLFNKKVPVGSTDSPLKQSITLSDYLELQSNQNSFSFSV 700
             F P   ++N   PP+ +TD    N+ +    +D+    S+  +  +++  ++   SF  
Sbjct: 644  IFNPDSIMNNSAFPPLRLTDLRASNEPL---ISDAAYSASLYDTKEIKIPYDRALLSFDY 700

Query: 701  AALSYQSPDMNTVLYKLEGYDSEWYSVGKNLI-TYSNLPYGTYVLKVKAANSDGIWNPDV 759
            +AL Y  P   +  Y LEG ++ W +V       YS L  GTYVL +++ N +GIWNP  
Sbjct: 701  SALEYSFPSRISYSYYLEGLENNWNNVRTARSGNYSRLHEGTYVLHIRSTNGEGIWNPRQ 760

Query: 760  RTLKIRILPPFYLSVWAYIIYVILILGALFATFFYFRKRAVEKHQRAMEKFEQEKERELY 819
             TLKI ILPP+Y S WAY+ Y+ +I   L+    Y   +    +Q  M     EKEREL 
Sbjct: 761  LTLKIIILPPWYRSWWAYLTYLAIISYLLYRFNRYKSNQVRLNYQIEMATANAEKERELN 820

Query: 820  TSKIEFFTNVAHEIRTPLTLIKSPLESVLTEKELPENVKMELEIMDQNAERLLNLTNQLL 879
              K+ FFT+++HE R+PLTLI +P++ +L       +V  +L I+  NA+RLL+L +QLL
Sbjct: 821  ERKLSFFTHISHEFRSPLTLIINPVKELLYSSGKNIDVS-DLSIVYLNAKRLLSLVDQLL 879

Query: 880  DFRKTENKGFKLNPVECSVGSIIRSVYKRFTTLVNQKGIELKVEIPEEELLASVDKEALT 939
             FRK +++   L   + ++  + + V+  FT+    K I++  E  EE +    D+E + 
Sbjct: 880  LFRKADHEEDDLKISKLNIVLVCKDVFLCFTSQARLKNIDITFESAEEYIEIFADREKIE 939

Query: 940  KILSNLFTNALKYAQTYAYLSLSVDEAGKEFTIVMSNDGKIIPIEMRENIFRPFVQYRDG 999
             +L N+ +NA K+ +    + + V++      I++ ++G+ I  E+ + +F  F Q    
Sbjct: 940  IVLFNILSNAFKFTEKNGSIHVKVEDYDGRIAILIQDNGRGIHPEIGDKLFDKFYQAPKS 999

Query: 1000 KDI-VPGTGIGLALARSLAELHQGTLTMDQD-----------MECNRFILSIPIRHQTAS 1047
             ++ V G GIGL LA+     H+G LT   +           ++    +  I + H+   
Sbjct: 1000 YNVSVKGFGIGLYLAKKFITSHKGELTYHSEIGEGTVFRIELLKGLEHLAGITVHHEDTE 1059

Query: 1048 DV-----LEEEHREKPVYDEEDNETRIMPSDKDKKEVASVLIVEDNKDMLAFVARQLSPL 1102
             +     L EE  E+PV   E  ++  +  D    E  ++LIV+DN+    ++ R     
Sbjct: 1060 FIMPDLDLAEEEAEEPVTAMEQPDSGEL--DNLVSEQPAILIVDDNELFRQYIKRIFKES 1117

Query: 1103 YHVITAENGIEALKVLEHEYINLVISDIMMPEMDGLELCEHLKSNLDYSHIPIILLTAKT 1162
            + +  A +G + L   + +  +++ISD+ MP  DG++LC  +K++   SHIP+ILLT+ T
Sbjct: 1118 FIIYEAVDGEDGLIKAKKQLPDIIISDVTMPVKDGIQLCTEIKADPAISHIPVILLTSST 1177

Query: 1163 TLESKIEGLEQGADAYIEKPFSVEYLRVNVANLLSNRERLRRRFIESPFIKADTMAQTKA 1222
            + E K++GLE GA+ YI KPF  E L   + N+L +R  L+R F  +  ++AD    +  
Sbjct: 1178 SSEIKLKGLECGAEDYITKPFEAELLTARINNILKSRNSLQRYFYNAVTLQADNQKISPT 1237

Query: 1223 DEVFIQKLNEYVSQHLDNTDLVIDDMAEAMNMGRSNFYRKLKGVLDMSPNEYLRLIRLKK 1282
             + F+ K      +HLDN D     +A  + M  S  Y+K+K +   S NE++R IRL+K
Sbjct: 1238 FKEFLSKCISITERHLDNPDFNTKVLANEVGMSHSALYKKVKSISGKSINEFIRFIRLRK 1297

Query: 1283 AAQLLKDGRYGIVEISYMVGFNSPSYFSNCFKKQFGVLPKDFMQ 1326
            AA+LL      + E ++  GFN+  YF   F K F + P ++++
Sbjct: 1298 AAELLIQTDSRVNEAAFRAGFNNQKYFREQFTKLFEMTPSEYIK 1341