Pairwise Alignments

Query, 1326 a.a., two-component system sensor histidine kinase/response regulator, hybrid ('one-component system') (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 1046 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

 Score =  735 bits (1897), Expect = 0.0
 Identities = 412/1048 (39%), Positives = 617/1048 (58%), Gaps = 57/1048 (5%)

Query: 28   YAFRSLDINNGLSQNTVHAILQDKQGFMWFGTKDGLDRYDGISFRAFMKE---SGTLGNN 84
            Y FR   + NGLS NT    +QD +GFMWFGTKDGL+R DG SF+ +  +   +G+LGN+
Sbjct: 12   YYFRHYQVENGLSNNTAFCSVQDGKGFMWFGTKDGLNRLDGYSFKTYRHDPDQAGSLGND 71

Query: 85   FITSLYEDQQGQIWIGTDVGLYVYSPEHETVERFIMKSDLDTGIDYTVNLVTGDKDGGIW 144
             I +L+ DQ+  +W+GT+ G+Y Y+   E+    I+K      I   ++L + D+ G +W
Sbjct: 72   LIYALHHDQEQSLWVGTNNGVYQYNAAKESFA--IIKETKGMRI---IDLAS-DQRGNLW 125

Query: 145  VVTQSQAVFYYNPQTNKLINYLSDQSGRLKFGSLGQLYFDSDNVCWLDIRDGNLYFSKDK 204
            +++ S  ++ Y  +T K+  +  +              FD+  V  L  +DG+++ S  K
Sbjct: 126  ILS-SFKIYLYQKRTRKIQAFTHNAP------------FDASLVTVL--KDGSVWISTGK 170

Query: 205  LQTLVPVFPKDGN--------EPFKGEY--ICKLLPGPYNCMYVGTIT-GLKEVNLTNKT 253
              TL    P++ N        +  K EY  + ++       + VGT   G+K  N     
Sbjct: 171  -GTLEKYNPRENNFQQFNINGKNAKTEYGWVSRIAETENGNLLVGTTNQGVKLFNPVTLA 229

Query: 254  VRTLLSKDESGDDIYVREIAFYSDDELWAGTESGLYIYNLRTKKTVHLRNVSGDPYSISD 313
             + +LS ++    I+VR+I      E W  TESG+YIYN   +  +H++    + YS+SD
Sbjct: 230  SKNILSLNDDQTPIFVRDIKKTGAHEFWIATESGIYIYNDENETIIHIKKQYNNDYSLSD 289

Query: 314  NAIYSICKDREGGIWIGSYFGGVNYYPKQYTYFDKVYPRTEIDEM-GKRVREFCADHDGT 372
            NA+Y+IC DREGG+W G+YFGGVNYY  + + F K +P+   + + G  VRE   D +G 
Sbjct: 290  NAVYTICLDREGGVWTGTYFGGVNYYSSRTSLFTKYFPQKGTNSISGSDVREITRDANGN 349

Query: 373  LWIGTEDKGLFHYYPSTGLIEPFRHPD------IYHNVHGLCLDGNYLWVGHFAKGLNRI 426
             WIGTED GL      TGL + F  PD       Y N+HGL +D + LWVG F  GL+ +
Sbjct: 350  FWIGTEDAGLNKLDIKTGLFKHFL-PDGKPGSIAYSNIHGLLVDCDKLWVGTFEHGLDVL 408

Query: 427  DLRTHAVKHYFDA-------PNDIFSICRTTSGNLWLGTTAGLFRYHSETNRFERVPELG 479
            DL+T  V  ++ A        N I + C+T SG + +GT  G++RY+ + + FE +  L 
Sbjct: 409  DLKTEKVIKHYQAGAGNALRTNFIVTFCKTRSGEILVGTINGIYRYNRKRDDFEPIAGLP 468

Query: 480  WVFIYNIKEDKQGNLWLATYIDGVYKRNVRTGEWEHYMHDETNPSSLPSNKVLSIFEDSQ 539
            ++F  ++ ED +GN+W  ++ DG+++ N+    + +Y ++ T   SL  N V SIFED +
Sbjct: 469  FIFYDSVIEDSKGNIWAGSFNDGLFQFNLSKPGYVNYRNNPTVIKSLSHNTVNSIFEDRK 528

Query: 540  NQLWFTTQGGGFCRFDPSGKIFVRYDSSIGLPSNVVHRIEEDEKGLFWITTNKGLVHFNP 599
             Q+W TT GGG CRFD   + F RY    G PSN + RIEED    FWI++ +GL+HF+P
Sbjct: 529  QQIWVTTDGGGLCRFDQKTQQFKRYGIKNGFPSNYLFRIEEDAANKFWISSTRGLIHFDP 588

Query: 600  KTLEFKVYTIANGLLSNQFNYQSSYKDKNGRIYFGSINGFISFEPSVFVDNDFLPPVVIT 659
             T   K Y+ ANGLL++QFNY S+Y+D+ GR YFGS+ G +SF P+      +  PV +T
Sbjct: 589  TTGLSKTYSKANGLLTDQFNYSSAYQDETGRTYFGSVKGLVSFNPANLKATTYETPVFLT 648

Query: 660  DFMLFNKKVPVGSTDSPLKQSITLSDYLELQSNQNSFSFSVAALSYQSPDMNTVLYKLEG 719
             F + + ++ +  TDS   +SI  +D +EL  NQ+SFS   AALSY SP+M    YK+ G
Sbjct: 649  GFQINSSEIGLNGTDSVANKSIVYADTIELNYNQSSFSIDFAALSYLSPEMTEYAYKMTG 708

Query: 720  YDSEW-YSVGKNLITYSNLPYGTYVLKVKA-ANSDGIWNPDVRTLKIRILPPFYLSVWAY 777
                W Y      + ++ L  G Y+ +VKA       W+     L I+I PPFYLS  AY
Sbjct: 709  LYKNWEYLKTNRKVYFTKLAPGNYIFEVKALVEGSSTWSTKNAKLLIKIHPPFYLSPLAY 768

Query: 778  IIYVILILGALFATFFYFRKRAVEKHQRAMEKFEQEKERELYTSKIEFFTNVAHEIRTPL 837
            ++Y+I   G +F     + ++   K+ R ME FE EK++E+Y +KIEFFTNVAHEIRTPL
Sbjct: 769  LLYLIAAGGIIFFLVRRYHRKIALKNSRRMEVFEHEKQKEVYQAKIEFFTNVAHEIRTPL 828

Query: 838  TLIKSPLESVLTEKELPENVKMELEIMDQNAERLLNLTNQLLDFRKTENKGFKLNPVECS 897
            TLI  P+E ++ + +    ++  L IM +N +RLL LTNQLLDFRKTE   F LN V+  
Sbjct: 829  TLIIGPMEKLIKQADAVPAIEKNLRIMGRNTDRLLKLTNQLLDFRKTETSEFSLNFVKAD 888

Query: 898  VGSIIRSVYKRFTTLVNQKGIELKVEIPEEELLASVDKEALTKILSNLFTNALKYAQTYA 957
            +  I++ V+ +F     Q  I+  + +PE++L A +D EA  K++SNL  NA+KY +T  
Sbjct: 889  ISEILKDVFLQFQPAAEQHDIKYNLHLPEKKLHAYIDVEAFYKMISNLIDNAIKYGKTTV 948

Query: 958  YLSLSVDEAGKEFTIVMSNDGKIIPIEMRENIFRPFVQYRDGKDIVPGTGIGLALARSLA 1017
             ++LS+ E G +F +++ NDG  IPIE+++ IF PF + ++  +I  GTGIGL++++SLA
Sbjct: 949  QINLSLQE-GDQFAVMVKNDGHRIPIEIKDKIFEPFFRGKE-TEIKAGTGIGLSISKSLA 1006

Query: 1018 ELHQGTLTMD-QDMECNRFILSIPIRHQ 1044
            +LH+G L +D  D + N F+L +PI HQ
Sbjct: 1007 QLHRGELYLDFNDRDFNIFVLELPI-HQ 1033