Pairwise Alignments

Query, 782 a.a., DNA topoisomerase I (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 812 a.a., type I DNA topoisomerase from Phocaeicola vulgatus CL09T03C04

 Score = 1152 bits (2981), Expect = 0.0
 Identities = 569/774 (73%), Positives = 667/774 (86%)

Query: 1   MQKNLVIVESPAKAKTIEKFLGKDFKVLSSYGHIRDLKKKEFSIDVDKNFKPDYEIPADK 60
           MQKNLVIVESPAKAKTIEKFLG D+KVLSSYGHIRDLKKKEFSIDV+  F+P YEIPADK
Sbjct: 1   MQKNLVIVESPAKAKTIEKFLGNDYKVLSSYGHIRDLKKKEFSIDVENGFEPTYEIPADK 60

Query: 61  KALVSTLKAEAKEAETVWLASDEDREGEAIAWHLYEVLKLKPENTKRIVFHEITKGAILK 120
           K LV+ LKAEAK+A+ VWLASDEDREGEAI+WHL+EVL L PE TKRIVFHEITK AILK
Sbjct: 61  KKLVAELKAEAKKADMVWLASDEDREGEAISWHLFEVLGLDPEKTKRIVFHEITKTAILK 120

Query: 121 AIEQPRNIDLNLVNAQQARRILDRIVGFELSPVLWRKVKPSLSAGRVQSVAVRLIVERER 180
           AIE PR+ID+NLVNAQQARRILDRIVGFELSPVLW+KVKP+LSAGRVQSVAVRLIVERER
Sbjct: 121 AIENPRDIDVNLVNAQQARRILDRIVGFELSPVLWKKVKPALSAGRVQSVAVRLIVERER 180

Query: 181 EIHAFKSEAAYRVIAIFLVPDTDGKLVEMKAELSRRIKTKEEAKAFLDACKGATFTIEDI 240
           E+HAF SE +YRV A+F VPD DG  VE+KAELS R KTKEEA+AFL+ CK A F+IEDI
Sbjct: 181 EVHAFVSEPSYRVTAVFEVPDVDGNEVEVKAELSNRFKTKEEAQAFLETCKDAQFSIEDI 240

Query: 241 TTRPVKKTPPAPFTTSTLQQEAARKLGYTVAQTMMIAQRLYESGFITYMRTDSVNLSEYA 300
           TTRPVKK+P APFTTSTLQQEAARKLG+TVAQTMM+AQRLYE+G ITYMRTDSVNLS+ A
Sbjct: 241 TTRPVKKSPAAPFTTSTLQQEAARKLGFTVAQTMMVAQRLYENGQITYMRTDSVNLSDLA 300

Query: 301 TASSKDAIIQMMGERYVHPRHFETKTKGAQEAHEAIRPTYMENQSIEGTAQEKKLYDLIW 360
             +SK  I+ +MGERYV  R F TKTKGAQEAHEAIRPTYMEN+++ GT QE+KLY+LIW
Sbjct: 301 LNTSKQTILSLMGERYVKVRKFATKTKGAQEAHEAIRPTYMENETVNGTGQEQKLYELIW 360

Query: 361 KRTIASQMADAELEKTTATISISKSGDAFTAIGEVIKFDGFLRVYRESYDDENEQEDESR 420
           KRTIASQMADAELEKTTATI IS S + F A GEVI FDGFLRVY+ESYDD+NEQEDE R
Sbjct: 361 KRTIASQMADAELEKTTATIVISNSSEKFIATGEVITFDGFLRVYKESYDDDNEQEDEGR 420

Query: 421 LLPPLKKGQKLEYGPIVATERFTQRPPRYTEASLVRKLEELGIGRPSTYAPTISTIQQRE 480
           LLPPL KG+KL    I+AT+RFTQ PPRYTEASLVRKLEELGIGRPSTYAPTIST+QQR 
Sbjct: 421 LLPPLSKGEKLIRKEILATQRFTQCPPRYTEASLVRKLEELGIGRPSTYAPTISTVQQRG 480

Query: 481 YVEKGNKDGEERTFNVLTLKDNQIKDESHNEVTGAEKSKLFPTDTGTVVNDFLTEYFPDI 540
           YVEKGN +G +R +++L LK  +I + +  E+TG EK+KL PTDTG VVNDFL EYFP+I
Sbjct: 481 YVEKGNSEGVKRPYDILKLKGGKITETTKTEMTGNEKAKLLPTDTGIVVNDFLMEYFPEI 540

Query: 541 LDYNFTASVEKEFDEIAEGEVKWTSIMKTFYDQFHPAVEKTLSIKTEHKVGERMLGEEPE 600
           +D+NFTA+VEKEFDE+AEGE +WT +M +FY  FHP V+KT+  KTEHKVGER+LG +P 
Sbjct: 541 MDFNFTANVEKEFDEVAEGEKEWTGMMDSFYKGFHPLVDKTIHSKTEHKVGERVLGTDPV 600

Query: 601 TGKPVSVKIGRFGPVVQIGAADDEEKPRFAQMKKGQSMETITLEEALELFKLPRTLGEYE 660
           +GKPVSVKIGRFGPV+QIG ADDEEKPRFAQ+ KG SMETITLEEAL+ FKLPRTLG+Y+
Sbjct: 601 SGKPVSVKIGRFGPVIQIGTADDEEKPRFAQLAKGLSMETITLEEALDAFKLPRTLGDYD 660

Query: 661 GKTVTVGIGRFGPYIQHNKVYVSLPKTLDPMKVTLEEAEQLILEKRTKEAERHIKKFDEE 720
           G TVTVG+GRFGPY++++K++VS+PK  DPM+++L+EA +LI  K   + ++ IK FD +
Sbjct: 661 GHTVTVGVGRFGPYVRYDKLFVSIPKGTDPMEISLDEAVELIKNKIEAQEKKFIKVFDAD 720

Query: 721 PELEILNGRYGPYIAYKGNNYKIPKDIVPQDLSLKSCFDLIKIQDEKGPGTSAK 774
           P++++LNGRYGPYI+Y+  NYKIP+++ P DLSL++CF +I++Q  K      K
Sbjct: 721 PDMQVLNGRYGPYISYQKKNYKIPENVEPADLSLEACFKVIELQKSKAETRKTK 774