Pairwise Alignments

Query, 447 a.a., preprotein translocase SecY subunit (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 446 a.a., preprotein translocase subunit SecY (RefSeq) from Shewanella amazonensis SB2B

 Score =  311 bits (796), Expect = 4e-89
 Identities = 173/436 (39%), Positives = 268/436 (61%), Gaps = 14/436 (3%)

Query: 14  IEDLRQRILITILFVAIYRFGSYVVLPGINPAMLAKLHEQTSEGLLALLNMFSGGAFSNA 73
           + +L+ R+L  I  + ++R GS+V +PGI+ A+LA+L  Q    +L + NMFSGGA   A
Sbjct: 15  LSELKARLLFVIGAIIVFRAGSFVPIPGIDAAVLAELFAQQKGTILGMFNMFSGGALERA 74

Query: 74  SIFALGIMPYISASIVIQLLGIAVPYFQKLQREGESGRRKMNQYTRYLTIAILLVQAPSY 133
           SIFALGIMPYISASI++QLL +  P   +L++EGESGRRK++QYTR+ T+ +   Q+   
Sbjct: 75  SIFALGIMPYISASIIMQLLTVVHPALAELKKEGESGRRKISQYTRWGTLVLGTFQSVGI 134

Query: 134 LLNL-KMQAGPSLNASLDWTLFMVTSTIILAAGSMFILWLGERITDKGIGNGISFIILIG 192
              L  +  G  +N       F   + + L  G+MF++WLGE+IT++GIGNGIS +I  G
Sbjct: 135 ATGLPNLVPGLVVNPGFG---FYFVAIVSLVTGTMFLMWLGEQITERGIGNGISILIFAG 191

Query: 193 IIARFPDALIQEVVSRVANKSGGLIMFIIEVVFLLLVIGAAILLVQGTRKIPVQYAKRIV 252
           I+A  P A+ Q            L++ +I V+ +  V    + + +G R+I V YAKR  
Sbjct: 192 IVAGLPSAIGQTAEQARQGDLNVLVLLLIGVI-VFAVTYFVVFVERGQRRIVVNYAKRQQ 250

Query: 253 GNKQYGGARQYIPLKVNAAGVMPIIFAQAIMFIPITFIGFSNNVNNAGGFLHAFTDHTS- 311
           GNK +     ++PLKVN AGV+P IFA +I+  P T   +    N A  +L   +   S 
Sbjct: 251 GNKIFAAQSTHLPLKVNMAGVIPPIFASSIILFPGTLAQWFGQ-NEALSWLSDISLAVSP 309

Query: 312 --FWYNFVFAVMIILFTYFYTAITINPTQMAEDMKRNNGFIPGIKPGKKTAEYIDDIMSR 369
               Y+ ++A  II F +FYTA+  NP + A+++K++  FIPGI+PG++T+ YID +M+R
Sbjct: 310 GQPLYSLLYAAAIIFFCFFYTALVFNPRETADNLKKSGAFIPGIRPGEQTSRYIDKVMTR 369

Query: 370 ITLPGSFFLALVAIMPAFAGIFGVQAGFAQF-FGGTSLLILVGVVLDTLQQVESHLLMRH 428
           +TL G+ ++  + ++P F  I    A   QF FGGTSLLI+V V++D + QV++H++   
Sbjct: 370 LTLAGALYITFICLIPEFMLI----AWKVQFYFGGTSLLIMVVVIMDFMAQVQTHMMSHQ 425

Query: 429 YDGLLKSGRIKGRAGV 444
           Y+ ++K   +  +A +
Sbjct: 426 YESVMKKANLINKANL 441