Pairwise Alignments

Query, 447 a.a., preprotein translocase SecY subunit (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 446 a.a., preprotein translocase subunit SecY (RefSeq) from Shewanella loihica PV-4

 Score =  316 bits (809), Expect = 1e-90
 Identities = 173/435 (39%), Positives = 270/435 (62%), Gaps = 12/435 (2%)

Query: 14  IEDLRQRILITILFVAIYRFGSYVVLPGINPAMLAKLHEQTSEGLLALLNMFSGGAFSNA 73
           + +L+ R+L  I  + ++R GS+V +PGI+ A+LA+L  Q    +L + NMFSGGA   A
Sbjct: 15  LSELKARLLFVIGAIIVFRAGSFVPIPGIDAAVLAELFNQQKGTILGMFNMFSGGALERA 74

Query: 74  SIFALGIMPYISASIVIQLLGIAVPYFQKLQREGESGRRKMNQYTRYLTIAILLVQAPSY 133
           SIFALGIMPYISASI++QLL +  P   +L++EGESGR+K++QYTRY T+ +   QA   
Sbjct: 75  SIFALGIMPYISASIIMQLLTVVHPALAELKKEGESGRKKISQYTRYGTLVLGTFQAIGI 134

Query: 134 LLNLKMQAGPSLNASLDWTLFMVTSTIILAAGSMFILWLGERITDKGIGNGISFIILIGI 193
              L     P L  +L +  + V + + L  G+MF++WLGE+IT++GIGNGIS +I  GI
Sbjct: 135 ATGLP-NLVPGLVVNLGFGFYFV-AVVSLVTGTMFLMWLGEQITERGIGNGISILIFAGI 192

Query: 194 IARFPDALIQEVVSRVANKSGGLIMFIIEVVFLLLVIGAAILLVQGTRKIPVQYAKRIVG 253
           +A  P A+ Q            L++ +I V+ +  V    + + +G R+I V YAKR  G
Sbjct: 193 VAGLPSAIGQTAEQARQGDLNVLVLLLIAVI-VFAVTYFVVFVERGQRRIVVNYAKRQQG 251

Query: 254 NKQYGGARQYIPLKVNAAGVMPIIFAQAIMFIPIT---FIGFSNNVNNAGGFLHAFTDHT 310
            K +     ++PLKVN AGV+P IFA +I+  P T   + G +  ++    F  A +   
Sbjct: 252 RKVFAAQSTHLPLKVNMAGVIPPIFASSIILFPGTLAQWFGQNEGLSWLSDFSLAVSPGQ 311

Query: 311 SFWYNFVFAVMIILFTYFYTAITINPTQMAEDMKRNNGFIPGIKPGKKTAEYIDDIMSRI 370
              Y+ ++A  II F +FYTA+  NP + A+++K++  FIPGI+PG++T+ YID +M+R+
Sbjct: 312 PL-YSLLYATAIIFFCFFYTALVFNPRETADNLKKSGAFIPGIRPGEQTSRYIDKVMTRL 370

Query: 371 TLPGSFFLALVAIMPAFAGIFGVQAGFAQF-FGGTSLLILVGVVLDTLQQVESHLLMRHY 429
           TL G+ ++  + ++P F  I    A   QF FGGTSLLI+V V++D + QV++H++   Y
Sbjct: 371 TLAGALYITFICLIPEFMLI----AWKVQFYFGGTSLLIMVVVIMDFMAQVQTHMMSHQY 426

Query: 430 DGLLKSGRIKGRAGV 444
           + ++K   +  +A +
Sbjct: 427 ESVMKKANLVNKANL 441