Pairwise Alignments

Query, 604 a.a., DNA mismatch repair protein mutS (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 894 a.a., DNA mismatch repair protein MutS from Burkholderia phytofirmans PsJN

 Score = 64.7 bits (156), Expect = 2e-14
 Identities = 47/178 (26%), Positives = 89/178 (50%), Gaps = 7/178 (3%)

Query: 385 DYIYPQITSQSFHLQAEALGHPLMNRN--KCVRNGIDMEKRPFFIIITGANMAGKSTYLR 442
           D++ P  ++ +  ++ E   HP++     + + N   +      ++ITG NM GKST++R
Sbjct: 585 DWVAPTFSANA-GIEIEQGRHPVVEAQVEQFIANDCSLTPERKLLLITGPNMGGKSTFMR 643

Query: 443 TVGVNYLLACIGAPVWAAKMEIFPA-RLVTSLRTSDSLTDNESYFFAELKRLKLIIDKLK 501
              +  LLA +G+ V A +    P  R+ T +  +D L    S F  E+     I++   
Sbjct: 644 QTALIALLAYVGSYVPARRAAFGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILN--D 701

Query: 502 AGEELFIILDEILKGTNSMDKQKGSFALIKQFMSMD-ANGIIATHDLLLGTLIDAFPQ 558
           A  +  +++DEI +GT++ D    ++A+ +  ++ +  + + ATH   L  L   FPQ
Sbjct: 702 ATPQSLVLMDEIGRGTSTFDGLALAWAIARHLLAHNGCHTLFATHYFELTQLPAEFPQ 759