Pairwise Alignments

Query, 233 a.a., conserved hypothetical protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 478 a.a., hypothetical protein from Burkholderia phytofirmans PsJN

 Score = 71.6 bits (174), Expect = 3e-17
 Identities = 53/225 (23%), Positives = 99/225 (44%), Gaps = 37/225 (16%)

Query: 34  GAAVVRRIYGDWTKKSLSGWKDAARDYSFRMVQASSF-VPGKNTTDIALVMDAMDILH-E 91
           G+ VV++ Y DW +     +K A  + +F +++       GKN+ DI LV+DA+D+ + +
Sbjct: 44  GSIVVKKAYCDWDR--YKSFKGAMHEANFELIEIPHVRQSGKNSADIRLVVDALDLCYTK 101

Query: 92  GRVGCFCLVASDGDYTLLAQRIRESGLTVLGYG-EGKTPAALVRSCTEFLLAD------- 143
             V  F +++ D D++ L  ++RE+   V+G G +  T   L+ +C EF   D       
Sbjct: 102 SHVNTFVIISGDSDFSPLVSKLRENAKQVIGVGVQQSTSDLLIANCDEFFFYDDLVRESQ 161

Query: 144 -----------RKEEKPFQENTPEFFIQRDMEYFDKAFEQAAD--------------GKA 178
                      ++  +P  +  P+    R+ E  +K   +A +                 
Sbjct: 162 RTVAKRESSRPQQSAQPAAKRAPDEEKTRNKEDLEKRRTKAVEIAVQTFDALASERGDSG 221

Query: 179 EVSLSLIGGVLKKLMPKFKVKRYGCRTLGKLYERLEKYELVKTGK 223
           ++  S++   +K+  P F    YG R  G L E      L++ G+
Sbjct: 222 KIWASVLKNAIKRRKPDFNETYYGFRAFGNLLEEAHARGLLEFGR 266



 Score = 23.5 bits (49), Expect = 0.008
 Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 5/69 (7%)

Query: 60  YSFRMVQASSFVPGKNTTDIALVMDAMDILHEGRVGCFCLVASDGDYTLLAQRIRESGLT 119
           Y +R   A+  V G NT + A ++++ + L+E +V    +  S G +     R R  G  
Sbjct: 273 YVYRSTAAN--VAGDNTGEPAEIVESAEQLYEAQVAETVIAESGGKH---ESRRRGRGNR 327

Query: 120 VLGYGEGKT 128
             G G+ +T
Sbjct: 328 KAGRGQQET 336