Pairwise Alignments

Query, 607 a.a., putative maturase/reverse transcriptase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 419 a.a., reverse transcriptasematurase from Sinorhizobium meliloti 1021

 Score =  115 bits (287), Expect = 5e-30
 Identities = 66/192 (34%), Positives = 105/192 (54%), Gaps = 5/192 (2%)

Query: 36  YVAYQNIYSKTGNMTAGADGKTIDGMSIDRVEQLI---GSLKNETYQPNPSKRTYIPKKN 92
           Y AY+ + +  G   AG DG+T++    D    L      + + TY P P +   IPKK 
Sbjct: 19  YEAYKAVKANRG--AAGVDGQTLEIFEKDLAANLYKIWNRMSSGTYFPPPVRAVSIPKKA 76

Query: 93  GKKRPLGIPSFDDKLVQEVVRMILEAIYEGSFEHTSHGFRPKRSCHTALIDIQKTFTAVK 152
           G +R LG+P+  D++ Q VV+ ++E   +  F   S+G+RP +S   A+   ++      
Sbjct: 77  GGERVLGVPTVSDRIAQMVVKQMIEPDLDSLFLPDSYGYRPGKSALDAVGVTRQRCWKYD 136

Query: 153 WFIEGDIKGFFDNINHDVLINILRERIADERFLRLIRKFLNAGYVEDWVFHRTYSGTPQG 212
           W +E DIKG FDN+ HD+L+  +R+ +     L  I ++L A   ++        GTPQG
Sbjct: 137 WVLEFDIKGLFDNLPHDLLLKAVRKDVKCNWALLYIERWLTAPMEKNGEVIERSRGTPQG 196

Query: 213 GIISPILANIYL 224
           G++SPILAN++L
Sbjct: 197 GVVSPILANLFL 208