Pairwise Alignments

Query, 432 a.a., conserved protein found in conjugate transposon (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 402 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

 Score = 67.8 bits (164), Expect = 6e-16
 Identities = 74/265 (27%), Positives = 113/265 (42%), Gaps = 26/265 (9%)

Query: 171 LRRIEELEHERQMKKPSQETTMEEKMALMEKSYELAARYNGKQATTTSPAMDKRQRTAVK 230
           L ++   ++ ++ K P Q  T  + M L  +   L     GK       A  +R+R A  
Sbjct: 152 LSKLNAPQNPKREKLPLQ--TQSDPMQLFRQQMALVDSM-GKANDPEFRAKKERERLA-- 206

Query: 231 PVKQVRHQVVSSLSQPASNGESGNGFTGERNVGFNTPVGKVLTSDRNTIPACVHGTQTVS 290
            +K +   V     + A NG+    F       F TP+  V+  D     A         
Sbjct: 207 SLKAISPPVKPLAVRKAENGDGA--FNTVMPEKFQTPLSAVIDQDITGFSA--------- 255

Query: 291 DGQALRIRLLEPMVADDRFIPKGTILTGG-ARMEGERLDILVQAVEYKGTVIPVELEVYD 349
               LRIRLL+ M+   R + KG  L    +   G+R+ + V +V   G + PV+L++YD
Sbjct: 256 --SRLRIRLLDDMLIGKRLVNKGMFLYAVISGFSGQRVLLSVNSVFVSGEIFPVKLDIYD 313

Query: 350 ADGQRGIPVPNSMEYDAAREIAANMGTSMNGSINI--STDAGAQIASDLGKGVIQGVSGY 407
            DG  GI VP S    A RE   ++G S    IN+  S +    +   LGK + Q  +  
Sbjct: 314 NDGLPGIYVPAS----AFREFTRDLGGSSVSGINLEQSENNNQLVMGVLGK-MFQSTTTA 368

Query: 408 VAKKMRTVKVTLKAGHRLLLHSPEQ 432
           V K +R+ K  LK    + L  P +
Sbjct: 369 VNKLIRSNKAKLKYNTMVYLIDPNE 393