Pairwise Alignments

Query, 432 a.a., conserved protein found in conjugate transposon (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 396 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

 Score = 57.4 bits (137), Expect = 8e-13
 Identities = 47/157 (29%), Positives = 71/157 (45%), Gaps = 11/157 (7%)

Query: 279 IPACVHGTQTVSDGQALRIRLLEPMVADDRFIPKGTILTGGARMEG---ERLDILVQAVE 335
           I A +    T   G  +R+RLLE + A    + KGT L   AR+ G   +R+ + + +V 
Sbjct: 241 ITAIIDEDITGYSGSRIRLRLLEEVYAGKSLLTKGTYLY--ARISGFSEQRVQLEINSVH 298

Query: 336 YKGTVIPVELEVYDADGQRGIPVPNSMEYDAAREIAANMGTSMNGSINISTDAGAQ--IA 393
             G ++PV+L +YD DG  G  VP S    A RE +  +G S     N    A  Q    
Sbjct: 299 CAGKILPVKLLLYDLDGLPGSYVPAS----AFREFSKGLGASSVQGFNTMGSALDQNEFV 354

Query: 394 SDLGKGVIQGVSGYVAKKMRTVKVTLKAGHRLLLHSP 430
                 + Q  S  +A  +R  +  LK  +++ L  P
Sbjct: 355 MSTASRLFQSTSSAIANMVRKNRAKLKYNNQVFLVDP 391