Pairwise Alignments

Query, 708 a.a., polyribonucleotide nucleotidyltransferase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 734 a.a., polynucleotide phosphorylase/polyadenylase from Cupriavidus basilensis FW507-4G11

 Score =  556 bits (1432), Expect = e-162
 Identities = 325/704 (46%), Positives = 438/704 (62%), Gaps = 13/704 (1%)

Query: 1   MINPIVKTIELPDGRTITLETGKLAKQADGSVMLRMGNTMLLATVCAAKDAVPGTDFMPL 60
           M N IVK  +    + + LETG++A+QA G+V++ + +T++LATV AAK    G DF PL
Sbjct: 3   MFNKIVKEFQWGQHK-VRLETGEVARQAGGAVIVDIEDTVVLATVVAAKSPKAGQDFFPL 61

Query: 61  QVEYKEKFAAFGRFPGGFTKREGRASDYEILTCRLVDRALRPLFPDNYHAEVYVNIILFS 120
            V+Y EK  A G+ PGGF KREGR S+ E LT RL+DR LRPLFP+ ++ EV V I + S
Sbjct: 62  TVDYIEKTYAAGKIPGGFFKREGRPSENETLTSRLIDRPLRPLFPEGFYNEVQVVIHVLS 121

Query: 121 ADGVDMPDALAGLAASAALAVSDIPFNGPISEVRVARIDGQFVINPTFDQLEKADMDLMV 180
            +     D  A + ASAALAVS IPF+GP+   RV   DGQ+++NPT  Q+  +++DL+V
Sbjct: 122 LNPEVPADIPALIGASAALAVSGIPFSGPVGAARVGYKDGQYLLNPTRSQIAASELDLVV 181

Query: 181 AATYDNIMMVEGEMHEVSEAELLEAMKVAHEAIKVHCKAQMELTEEVGKTVKREYNHEVN 240
           A T   ++MVE E  ++SE  +L A+   HE ++    A  +L  + GK  + ++     
Sbjct: 182 AGTERAVLMVESEARQLSEEVMLGAVVYGHEQMQTAINAIHDLVRDGGKP-EWDWTAAPK 240

Query: 241 DEELRKAVREACYDKAYAVAASGNNNKHERFDAFDAIREEFKAQFSEEELEEKAPLIDRY 300
           +E L   V E        V       K  R      +     A+ +E  +E     +   
Sbjct: 241 NEALIAKVGEIALPLLQDVYQL--RQKSARSQKLKEVYATVAAKLAEAGVEADKVEVGNV 298

Query: 301 YHDVEKEAMRRSILDEGKRLDGRKTTEIRPIWCEVGPLPGPHGSAIFTRGETQSLTSVTL 360
             D+E + +R  +L    R+DGR T  +RPI      LP  HGSAIFTRGETQ+L   TL
Sbjct: 299 LFDIEAKIVRSQVLSGEPRIDGRDTRTVRPIEIRSSVLPRAHGSAIFTRGETQALVVATL 358

Query: 361 GTKLDEKIIDNVLEHGKERFLLHYNFPPFSTGEAKAQRGVGRREIGHGHLAWRALKGQIP 420
           GTK DE+IID +    ++RF+LHYN PPF+TGE        RREIGHG LA RAL   +P
Sbjct: 359 GTKGDEQIIDALAGEYRDRFMLHYNMPPFATGETGRVGSPKRREIGHGRLAKRALIPVLP 418

Query: 421 AD--YPYVVRVVSEILESNGSSSMATVCAGTLALMDAGVKIKKPVSGIAMGLIKNPGEEK 478
            D  + Y +R+VSEI ESNGSSSMA+VC G LALMDAGV IK  V+G+AMGLI      K
Sbjct: 419 KDDEFAYTIRLVSEITESNGSSSMASVCGGCLALMDAGVPIKAHVAGVAMGLILE--GNK 476

Query: 479 YAVLSDILGDEDHLGDMDFKVTGTRDGITATQMDIKVDGLSYEILERALNQAKEGRMHIL 538
           +AVL+DILGDEDHLGDMDFKV GT  GITA QMDIKV G++ EI++ AL QAKEGR+HIL
Sbjct: 477 FAVLTDILGDEDHLGDMDFKVAGTDTGITALQMDIKVQGITKEIMQVALAQAKEGRLHIL 536

Query: 539 DKITETIAEPRADLKDHAPRIETMTIPKEFIGAVIGPGGKIIQGMQEETGAVITIEETDG 598
            K+ + +   R +L +HAPR+ TM I  + I  VIG GG  IQ + +ETG  I I+E   
Sbjct: 537 GKMQDAMGHARTELSEHAPRMITMKIHPDKIREVIGKGGSTIQALTKETGTTIDIQED-- 594

Query: 599 MGRIEVSGTNKKCIDDAMRMIKAIVAVPEVGEVYKGKVRSIMPYGAFIEFLPGKDGLLHI 658
            G I ++ T+ + + +A R I+ I A  EVG++Y G V  ++ +GA +  LPGKDGLLHI
Sbjct: 595 -GTITIASTSTEGMAEAKRRIEGITAEAEVGKIYAGTVLKLLDFGAIVNILPGKDGLLHI 653

Query: 659 SEIDWKRLETVEEAGIKEGDEIEVKLIDIDPKTGKFKLSRKVLM 702
           SEI  +R++ +++  +KEG  + VKLI  D K G+ +LS K  +
Sbjct: 654 SEIVNERVKDIKD-WLKEGQHVRVKLIQADEK-GRLRLSLKAAL 695