Pairwise Alignments

Query, 311 a.a., putative anti-sigma factor (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 372 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

 Score =  139 bits (350), Expect = 1e-37
 Identities = 78/207 (37%), Positives = 113/207 (54%), Gaps = 6/207 (2%)

Query: 89  HHVLQDKEEN--MQTVVVPAGQHAELYLADGTHVWLNSGSRLTFPGRFSKKVRHVELDGE 146
           + V+ D  E   + TV +P G    L L DG+ VWLN+ S + FP RF+   R VELDGE
Sbjct: 153 YDVISDASEEVVLNTVSIPRGGQYALVLPDGSKVWLNAASSIRFPTRFTGNSREVELDGE 212

Query: 147 GYFKVSSNIKQPFIVGTNRCNIRVLGTEFNVLAYEKDSIWETALLEGAVEILQKKSEVSL 206
            YF+V+ N + PF V T    ++VLGT FN++AY+ ++  +T LLEG V +    S  ++
Sbjct: 213 AYFEVARNKQMPFYVKTQDMKLKVLGTHFNMMAYKDEAFIKTTLLEGKVML---TSASAV 269

Query: 207 MKLKPGDMARLSKNQLTKEKIHTTDYFRWKEGLICFNDISLRDIMEKLKLYYDVNFVINN 266
             LKPG+   L +N+ T  K        WK G   FN+ +L  +M K+  +YD++ V N 
Sbjct: 270 TYLKPGEEGVLFENKFTVNKADIEQTMAWKNGYFVFNEENLSSVMRKISRWYDIDIVYNT 329

Query: 267 QQILDAHYTGKFRTHDGIEHVIRVLAL 293
                  YTG       I  V++VL+L
Sbjct: 330 HN-NKLSYTGSVSKFKDISEVLKVLSL 355