Pairwise Alignments

Query, 311 a.a., putative anti-sigma factor (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 392 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

 Score =  118 bits (296), Expect = 2e-31
 Identities = 71/195 (36%), Positives = 109/195 (55%), Gaps = 5/195 (2%)

Query: 101 TVVVPAGQHAELYLADGTHVWLNSGSRLTFPGRFSKKVRHVELDGEGYFKVSSNIKQPFI 160
           T+ VP G   ++ L D + VWLN+ S +T+P  F    R V++ GE YF+V+ N K PF 
Sbjct: 186 TIEVPVGGQWQVILPDHSKVWLNALSSITYPIHFIGNEREVKISGEAYFEVAHNAKMPFK 245

Query: 161 VGTNRCNIRVLGTEFNVLAYEKDSIWETALLEGAVEILQKKSEVSLMKLKPGDMARLSKN 220
           V      + VLGT FNV+AY +D + +T LLEG+V+I + K  VS + L PG+ A+++  
Sbjct: 246 VHAGSQVVEVLGTHFNVMAYAEDKVIKTTLLEGSVKISEGK--VSKL-LVPGEQAQVNAG 302

Query: 221 QLT-KEKIHTTDYFRWKEGLICFNDISLRDIMEKLKLYYDVNFVINNQQILDAHYTGKFR 279
           ++T    I   D   WK G   F+D +L  IM K+  +YDV+ V   +   +  Y GK  
Sbjct: 303 KITVTNDIDMEDVVAWKNGYFKFDD-NLETIMTKVAKWYDVDVVYQTKPDPNNVYAGKVS 361

Query: 280 THDGIEHVIRVLALN 294
               I  +++++  N
Sbjct: 362 RAKNISSLLKIIEFN 376