Pairwise Alignments

Query, 311 a.a., putative anti-sigma factor (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 393 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

 Score =  117 bits (294), Expect = 3e-31
 Identities = 68/211 (32%), Positives = 110/211 (52%), Gaps = 5/211 (2%)

Query: 85  YFYTHHVLQDKEENMQTVVVPAGQHAELYLADGTHVWLNSGSRLTFPGRFSKKVRHVELD 144
           Y ++         +  T+ VP G   ++ L D T VWLN+ S +T+P +F+   R V++ 
Sbjct: 171 YDFSKTTSNGSPSSFNTLSVPIGGQWQVILPDQTKVWLNAQSSITYPTKFNGNQRKVKIS 230

Query: 145 GEGYFKVSSNIKQPFIVGTNRCNIRVLGTEFNVLAYEKDSIWETALLEGAVEILQKKSEV 204
           GE YF+V+ N K PF V +    + VLGT FN++AY  + I +T LLEG+V+I   +   
Sbjct: 231 GEAYFEVAHNKKMPFKVESRGQVVEVLGTHFNIMAYADEEIIKTTLLEGSVKIFNNRQS- 289

Query: 205 SLMKLKPGDMARLSKNQLT-KEKIHTTDYFRWKEGLICFNDISLRDIMEKLKLYYDVNFV 263
               LKPG  A  S N ++  + +   +   WK G   FN+ +L  IM K+  +Y+V  V
Sbjct: 290 --QLLKPGQQAVASSNGISLSDYVDVEEAIAWKNGDFQFNE-NLETIMSKIARWYNVEVV 346

Query: 264 INNQQILDAHYTGKFRTHDGIEHVIRVLALN 294
              +   D  ++G+      I  ++++L  N
Sbjct: 347 YQVKPSSDLTFSGRISRSRNISAILKMLEYN 377