Pairwise Alignments

Query, 311 a.a., putative anti-sigma factor (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 373 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

 Score =  120 bits (300), Expect = 7e-32
 Identities = 72/208 (34%), Positives = 113/208 (54%), Gaps = 15/208 (7%)

Query: 101 TVVVPAGQHAELYLADGTHVWLNSGSRLTFPGRFSKKVRHVELDGEGYFKVSSNIKQPFI 160
           T+  P G   ++ L DGT VWLN+ + L +P  F+K  R VEL+GE YF+VS +  +PF 
Sbjct: 165 TIATPRGGQYQVSLPDGTKVWLNAATTLKYPYAFAKNERVVELNGEAYFEVSKDHTRPFR 224

Query: 161 VGTNRCNIRVLGTEFNVLAYEKDSIWETALLEGAVEILQKKSEVSLMKLKPGDM------ 214
           V T+   + VLGT FNV AY  + + +T LLEGAV++    + V+   L PG+       
Sbjct: 225 VKTDAQTVEVLGTHFNVNAYGDEPMVKTTLLEGAVKVSAASATVN---LHPGEQSQFNAY 281

Query: 215 -ARLSKNQLTKEKIHTTDYFRWKEGLICFNDISLRDIMEKLKLYYDVNFVINNQQILDAH 273
            ARLS NQ    ++       WK  +  F++  L+ +M ++  +YDV+ V+   +I    
Sbjct: 282 NARLSVNQ----QVDIDKEMAWKNNIFSFDNDDLQTVMRQISRWYDVD-VVYQGKIRPEK 336

Query: 274 YTGKFRTHDGIEHVIRVLALNNKFTYIK 301
           Y G+   +  +  V ++L LN+    +K
Sbjct: 337 YVGEIPKNSNLAEVFKILELNHVHIEVK 364