Pairwise Alignments

Query, 311 a.a., putative anti-sigma factor (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 384 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

 Score =  120 bits (301), Expect = 5e-32
 Identities = 71/201 (35%), Positives = 110/201 (54%), Gaps = 7/201 (3%)

Query: 98  NMQTVVVPAGQHAELYLADGTHVWLNSGSRLTFPGRF-SKKVRHVELDGEGYFKVSSNIK 156
           N  T+  P G   ++ L DGTHVWLNS S L +P  F S K R VEL GE YF+V+ + K
Sbjct: 174 NFNTIETPRGGQYQVLLPDGTHVWLNSSSSLKYPASFASMKTRRVELKGEAYFEVARDKK 233

Query: 157 QPFIVGTN-RCNIRVLGTEFNVLAYEKDSIWETALLEGAVEILQKKSEVSLMKLKPGDMA 215
            PF+V  N R  + VLGT FN++A++ + + +T L+EG+V+I           LKPG+ A
Sbjct: 234 IPFLVRINDRAEVLVLGTHFNIMAFDDEPVIKTTLIEGSVKIANNNFN---NLLKPGEQA 290

Query: 216 RLS-KNQLTKEKIHTTDYFRWKEGLICFNDISLRDIMEKLKLYYDVNFVINNQQILDAHY 274
            L+   Q+   ++   +   WK G   F D  L+ IM ++  +YD++ V     I    +
Sbjct: 291 ELTDAGQIVINQVDVNESIAWKNGQTLFVDQDLKSIMRQVSRWYDLD-VEYRGVIPKRLF 349

Query: 275 TGKFRTHDGIEHVIRVLALNN 295
           TG       +  ++++L L++
Sbjct: 350 TGGISREANLSALLKILELSH 370