Pairwise Alignments

Query, 572 a.a., putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 579 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

 Score =  134 bits (336), Expect = 1e-35
 Identities = 148/514 (28%), Positives = 222/514 (43%), Gaps = 55/514 (10%)

Query: 81  TLNGQNAWVTSLWGNQYKAISRANAVIEKSHRAIENGASATTINRLIAEAKFHRAAAYAK 140
           T+N  + W T      Y  I   N +++K              N+L  +A F RA  Y +
Sbjct: 90  TINSVDFWTTY---KAYDIIRSINLLLQKLPTT---PYQQNDKNKLRGQALFLRAWVYFQ 143

Query: 141 LIVKFGDLPLVLTDVSTEEGLTMGRTDKSIVLAQIYKDFDDAISVLPTSYT--DQQRATQ 198
           ++ ++G +PLVLT  S EE L + R   S  +AQI KD D+A ++LP S+   D+ R T+
Sbjct: 144 MVSRYGGVPLVLTPQSLEEDLNVKRNKTSECIAQITKDLDEASTLLPVSWATDDEGRITK 203

Query: 199 GAALALKARVALIMED-----------WETAADAAKAVMDLNIYE---LHPDFGNLFLST 244
           GAALA K RV L               W+TA DA KA MD+   +   L P F  L+   
Sbjct: 204 GAALAFKGRVLLHYASEQFTPVQQQTRWQTAFDANKAAMDVLTQQGAALMPSFAGLWFIE 263

Query: 245 TKNSNEFIF--KIPRDATYDIYLGTGNGGVNQVYNDLPRNVGGWTQTCPSWELLAAFTCT 302
              + E I   +      +     T +  V  +  +  +N  G  Q  P+ +L+ AF   
Sbjct: 264 GNGNKEAILVTRFNNPGRFQ----TRDASVRPL--EESQNFTGGDQ--PTLQLVNAFPMK 315

Query: 303 DGLLINE-SPLFDPHEPFANRDPRLAETIVPFGSNHLGYEYNPHPEALTCMNYNTGEIVT 361
           +GL I + +  +DP   + NRDPR A T+V             H   +  ++   G    
Sbjct: 316 NGLPITDPNSGYDPKAYWLNRDPRFATTVV-------------HNGDIWELSGKAGRTQW 362

Query: 362 NYDTRANAQYASFDGLVWKKGIDETWLQ-NGFKVDQDIIYCRYAEILLTYAEAKIELNEI 420
            +   A AQ  +      +KGI E +          D I  R+AE++L YAE   E+  I
Sbjct: 363 TF-KGAEAQGGTGTSFYSRKGIFEAYKPFEASTSGTDWIEIRFAEVMLNYAETANEIGNI 421

Query: 421 DNSVLDALNEVRARAYGVDKSDKASYPAFTSNDQSTLRHQLRVERRMEMAKEHMRYTDII 480
                D L  +R RA G+D      Y       Q+ +R  +  ER +E A E  R  D+ 
Sbjct: 422 QIG-YDMLTAIRKRA-GIDAGANNLYGLKAGMTQTEMRKAILDERLLEFAFEGKREQDLR 479

Query: 481 RWKLAEKVMN-RKTYGILYPASLCIERVTSQGDWFWAFTPEMDEDGCADFSKLEEAG-KC 538
           R +L   ++N +K  G  Y A+L I+      D+F A+           F   +E     
Sbjct: 480 RRRLYASLLNGKKRTG--YDATL-IKFDGKPQDFFTAYATGTINLKTNYFDYFKETELPI 536

Query: 539 QALAVRSWNDRQYLWPIPTTELQINENLKQNPGY 572
                 ++ D  Y + IP + LQ N NL+Q  G+
Sbjct: 537 DLTNTINFKDEYYFYAIPQSHLQKNPNLQQTKGW 570