Pairwise Alignments

Query, 572 a.a., putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 577 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

 Score =  147 bits (372), Expect = 9e-40
 Identities = 159/623 (25%), Positives = 255/623 (40%), Gaps = 100/623 (16%)

Query: 3   KLLLYIGAGILLLSACHDLNLNPLSSGSTEN-------WYSTETEVQMAVDELYRYDFWP 55
           KLL +I   IL +SA      + + +G T+        W  +   +Q+ +  +Y  D  P
Sbjct: 2   KLLKHIALLILAVSALFSCKKDGVLTGDTQTDIFDKDVWTDSVRTIQI-LTSIYA-DLGP 59

Query: 56  ED-------GQQQTDWSDDYTSRDLLTSFDDGTLNGQNAWVTS--------LWGNQYKAI 100
           E            +++SD+   R   T+        Q  +  S        +W N YK+I
Sbjct: 60  ESMTTRINTSNSLSEFSDESDERWTTTNVSPAAAFQQGNYSPSSLPDPFNNIWKNTYKSI 119

Query: 101 SRANAVIEKSHRAIENGASATTINRLIAEAKFHRAAAYAKLIVKFGDLPLVLTDVSTEEG 160
            +AN  I    R  E+  S+    R+ AEA+F RA  Y  L+  +  +PLV   ++ ++ 
Sbjct: 120 RKANLFIS---RVDESPLSSALKKRMKAEARFLRAWYYHLLMKHYAGIPLVDRVLTLDDD 176

Query: 161 LTMGRTDKSIVLAQIYKDFDDAISVLPTSYTDQQ-----RATQGAALALKARVALI---- 211
             + R      +  + KD + A + LP  YT  +     R T+GA LALKARV L     
Sbjct: 177 FNLPRNSYEECVNYVVKDLESASADLPMEYTGTEGYNHGRITKGACLALKARVLLFAASP 236

Query: 212 -------------------MEDWETAADAAKAVMDLNIYELHPDFGNLFLSTTKNSNEFI 252
                               + W  AA AAKAV+DLN Y L    G    +     N F+
Sbjct: 237 LFNGGAANANPVFGYPTEDKQRWTKAAAAAKAVIDLNYYSLLQGDGGNNSTAEGFYNVFL 296

Query: 253 FKIPRDATYDIYLGTGNGGVNQVYND--LPRNVGGWTQTCPSWELLAAFTCTDGLLIN-E 309
            ++ ++  +    G+     N+ Y +  LP + GG     P+ + +  +   +G+ IN  
Sbjct: 297 LRVNKEMIFARLAGS-----NRTYENSHLPASRGGAYHNAPNGDYVDTYPMRNGMPINAP 351

Query: 310 SPLFDPHEPFANRDPRLAETIVPFGSNHLGYEYNPHPEALTCMNYNTGEIVTNYDTRANA 369
              +DP  P+ NRDPR   +I+  G++ L    N      T  N     +   Y T    
Sbjct: 352 GSGYDPQNPYVNRDPRFYRSIIYNGASWLNPSTNTKQPVFTYFNAPNDGLSIPYITPGTE 411

Query: 370 QYASFDGLVWKKGIDETWLQNGFKVDQDIIYCRYAEILLTYAEAKIELNEIDNSVLDALN 429
                 G   +K + E    +         + RYAE+LL YAEA  E  +  ++  + + 
Sbjct: 412 -----TGYYNRKMMSEDVTGSTGGTQHFFPFLRYAEVLLNYAEALNEAGQTTDA-YEPMR 465

Query: 430 EVRARAYGVDKSDKASYPAFTSNDQSTLRHQLRVERRMEMAKEHMRYTDIIRWKLAEKVM 489
           ++R RA  +     A+ P  T  +Q  +R  +R ERR+E+A E  R+ DI RWK     +
Sbjct: 466 QIRERAGLL----PANLP--TGLNQEQMRKYIRDERRIELAYEDHRFWDIRRWK-----V 514

Query: 490 NRKTYGILYPASLCIERVTSQGDWFWAFTPEMDEDGCADFSKLEEAGKCQALAVRSWNDR 549
              TY  +      I+                + +G   + K+              N  
Sbjct: 515 GASTYATVLTGMKIIK----------------NANGTYSYEKINIPKPISVFIEPKMN-- 556

Query: 550 QYLWPIPTTELQINENLKQNPGY 572
             L PIP  ++ I++ L QNPG+
Sbjct: 557 --LLPIPAIQVNISDKLFQNPGW 577