Pairwise Alignments

Query, 572 a.a., putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 541 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

 Score =  132 bits (331), Expect = 5e-35
 Identities = 141/500 (28%), Positives = 215/500 (43%), Gaps = 77/500 (15%)

Query: 90  TSLWGNQYKAISRANAVIEKSHRAIENGASATTIN-----RLIAEAKFHRAAAYAKLIVK 144
           +S++ + Y   S + + I ++ R +EN ++A   +     R  AEA+  RA  +  L + 
Sbjct: 102 SSIYDSYY---SVSYSYIRRTCRFLENYSTAYVQDPKIKERYAAEARSLRAFYHLILWLY 158

Query: 145 FGDLPLVLTDVSTEEGLTMGRTDKSIVLAQIYKDFDDAISVLPTSYT--DQQRATQGAAL 202
           +G +P+V   +S ++      T +++V   I  D   AI  LP +YT  D  R ++G   
Sbjct: 159 YGPVPIVNHSLSAQDANQPRATQENMVKF-ISDDLLAAIPNLPDNYTENDNYRFSKGTCY 217

Query: 203 ALKARVALIMEDWETAADAAKAVMDLNI---YELHPDFGNLFLSTTKNSNEFIFKIPRDA 259
           +L + + L  +D+  AA  +K V+D      Y+LH        S T NS   +F      
Sbjct: 218 SLLSILYLNAKDYPKAAQYSKMVIDNKAAFGYDLHTA-----TSPTVNSYADLFSYNGIT 272

Query: 260 TYDIYLGTGNGGVNQVYNDLPRNVGGWTQTCPSWELLAAFTCTDGLLINE----SPLFDP 315
           + +  +               R++GG   T P+   +  F    G  + E    S     
Sbjct: 273 SKERIIFRKGANPEAFLRQTSRSMGGHAVTSPTASFVNCFETKQGKTLEELGPDSVAVYT 332

Query: 316 HEP--FANRDPRLAETIVPFGSNHLGYEYNPHPEALTCMNYNTGEIVTNYDTRANAQYAS 373
            EP    NRDPRL  +++      LG  +NP  ++           V N D R    YA+
Sbjct: 333 REPTYHNNRDPRLGISVLMPNEVFLGKLFNPFDQS-----------VANVD-RIGQAYAT 380

Query: 374 FDGLVWKKGIDETWLQNGFKVDQDIIYCRYAEILLTYAEAKIELNEIDN-SVLDALNEVR 432
             G   KK +D + +   +         RYAEILL YAEA IE  +  N  VL  +N+VR
Sbjct: 381 QTGYFSKKYVDPSDISRPYSGGLGFYIIRYAEILLNYAEALIESGDYQNPDVLTYINQVR 440

Query: 433 ARAYGVDKSDKASYPAFTSNDQSTLRHQLRVERRMEMAKEHMRYTDIIRWKLAEKVMNRK 492
            RA G+ ++  A Y     N Q  +R  LR ERR+E   E  R  DI RW++ E+V++  
Sbjct: 441 TRA-GMPEATSAQY-----NTQEKIRELLRRERRVEFGLEGKRLFDIRRWRIGEQVLDGP 494

Query: 493 TYGILYPASLCIERVTSQGDWFWAFTPEMDEDGCADFSKLEEAGKCQALAVRSWNDRQYL 552
            YG                    AF P +++        L E     A        R YL
Sbjct: 495 VYG--------------------AFDPNINK------PYLSETRVFSA-------KRDYL 521

Query: 553 WPIPTTELQINENLKQNPGY 572
           WPIP  E+  N N+ QN G+
Sbjct: 522 WPIPLAEVNANTNIVQNSGW 541