Pairwise Alignments

Query, 572 a.a., putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 551 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

 Score =  128 bits (321), Expect = 7e-34
 Identities = 160/598 (26%), Positives = 251/598 (41%), Gaps = 103/598 (17%)

Query: 12  ILLLSACHD-LNLNPLSSGSTENWYSTETEVQMAVDELYRYDF--WPEDGQ---QQTD-- 63
           +LL   C   L L PL++ S ++ ++    VQ+ V+ +Y      + + G     QTD  
Sbjct: 20  LLLTGGCKKALELQPLNAYSEKDVWTDPKLVQVFVNSIYDQTVLAYQDSGLGWGAQTDEL 79

Query: 64  -WSDDYTSRDLLTSFDDGTLNGQNAWVTSLWGNQYKAISRANAVIEKSHRAIENGASATT 122
             + ++T+ +L     + T + Q++   + W   Y +I  +N      ++    G +  T
Sbjct: 80  YGNFNWTNENLYVR-GEATPDNQSSGSLNHWNKMYASIRYSNIFFANINQVTGGGDAVKT 138

Query: 123 INRLIAEAKFHRAAAYAKLIVKFGDLPLVL-----TDVSTEEGLTMGRTDKSIVLAQIYK 177
           +     E  F RA AY +L+ +FG +PL++      D S  E        K  +LA    
Sbjct: 139 MK---GEVYFLRALAYFELLKRFGGVPLIVKVYDVNDKSFNEKRATWNETKDFILA---- 191

Query: 178 DFDDAISVLPTSYT---DQQRATQGAALALKARVALIMED-----------WETAADAAK 223
           D  +A+  LPT Y    D+ RAT GAALALK+R+ L               WE A  AAK
Sbjct: 192 DITEALKTLPTVYANSNDKGRATAGAALALKSRLLLYAASPYFNKTNDKKLWEDAKLAAK 251

Query: 224 AVMDLNI--YELHPDFGNLFLSTTKN---SNEFIFKIPRDATYDIYLGTGNGG-VNQVYN 277
           AV+D     Y L+ +  N   + T     ++E IF         +Y G       N V  
Sbjct: 252 AVIDFATPKYALYGNAANGTYNKTYLDFFNSEIIFS-------RVYSGLVRADRYNTVSR 304

Query: 278 DL-PRNVGGWTQTCPSWELLAAFTCTDGLLINESPLFDPHEPFANRDPRLAETIVPFGSN 336
           DL P    G++      +++  F   DG   + S      EP+ NR+PR   TI+     
Sbjct: 305 DLSPNGYNGYSAYNVVQQMVDDFEMADGTKFSWSNPAQAKEPYLNREPRFYATILANNQQ 364

Query: 337 HLGYEYNPHPEALTCMNYNTGEIVTNYDTRANAQYASFDGLVWKKGIDET--WLQNGFKV 394
             G         LT   Y  G+   +  +  +   AS      KK ++E   W    +  
Sbjct: 365 FKG--------RLTSF-YEGGD--DSPQSPYSPWNASKTRYCVKKMVNEAFDWNVQDYDA 413

Query: 395 DQDIIYCRYAEILLTYAEAKIELNEIDNSVLDALNEVRARAYGVDKSDKASYPAFTSNDQ 454
            Q +++ R +EI L YAEA   + E D   L+ LN++R        ++KA  PA  S   
Sbjct: 414 SQWVVF-RLSEIYLNYAEACAAIGE-DGEALNYLNKIR--------TEKAGMPA-VSGSG 462

Query: 455 STLRHQLRVERRMEMAKEHMRYTDIIRWKLAEKVMNRKTYGILYPASLCIERVTSQGDWF 514
           + L  ++R ERR+E+  E  RY DI RW +AE   +    G+          +T Q +  
Sbjct: 463 AVLMDKIRHERRIELCFEGHRYFDIRRWGIAE-TGSEDAKGV---------TITKQANGT 512

Query: 515 WAFTPEMDEDGCADFSKLEEAGKCQALAVRSWNDRQYLWPIPTTELQINENLKQNPGY 572
           + +                       +  R+W    Y +PIP +E+Q N  + QNP Y
Sbjct: 513 FTYA-------------------LMTVQERTWVPSFYFYPIPRSEIQKNPAIVQNPNY 551