Pairwise Alignments

Query, 572 a.a., putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 542 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

 Score =  130 bits (327), Expect = 1e-34
 Identities = 147/500 (29%), Positives = 209/500 (41%), Gaps = 81/500 (16%)

Query: 92  LWGNQYKAISRANAVIEKSHRAIENGASATTINRLIAEAKFHRAAAYAKLIVKFGDLPLV 151
           +W   Y  I RAN  + K           T      AEA+F RA  Y +L+ ++G +PL+
Sbjct: 103 VWSKNYLGIRRANLFLSKVDVVPTTAVLKTQFK---AEARFLRAYFYFELVKRWGGVPLI 159

Query: 152 LTDVST-EEGLTMGRTDKSIVLAQIYKDFDDA-ISVLPTSYTDQQ--RATQGAALALKAR 207
              V T  + + + R       A I  + D    S+LP + TD    RA  GAA+ALK+R
Sbjct: 160 GDKVYTINDDINVPRNTLDECYAYIVAELDAIKSSLLPYAITDGDWGRANIGAAMALKSR 219

Query: 208 VALI-----------MEDWETAADAAKAVMDLNIYELHPDFGNLFLSTTKNSNEFIFKIP 256
           V L            ++ W  AA AA  V  L  Y L  D+   F + TKN+ EFIF   
Sbjct: 220 VLLYAASPLSNPTNNIQKWALAAQAAADVKALG-YTLVTDWVANF-NATKNT-EFIFIKQ 276

Query: 257 RDATYDIYLGTGNGGVNQVYNDLPRNVGGWTQTCPSWELLAAFTCTDGLLINES-PLFDP 315
                +I +  G  G  Q          G   T PS  L+ AF   DG  I+++   +D 
Sbjct: 277 NVLNTNIEINNGPIGYLQ----------GLGLTSPSQNLVDAFLMLDGKAISDAGSTYDS 326

Query: 316 HEPFANRDPRLAETIVPFGSNHLGYEYNPHPEALTCMNYNTGEIVTNYDTRANAQYASFD 375
           + P+ NRDPRL  TI+  G N LG               N  +  T Y  R         
Sbjct: 327 NNPYLNRDPRLTATIMHNGKNWLGRPVETFEGGQDKPGGNRTQTRTGYYLRK-------- 378

Query: 376 GLVWKKGIDETWLQNGFKVDQDIIYCRYAEILLTYAEAKIELNEIDNSVLDALNE---VR 432
             + K     T+          +I  RYAEILL +AEA   LNE   +V D +N    +R
Sbjct: 379 -FMGKFETSTTYTNQA----HHVILLRYAEILLNHAEA---LNESGGAVADIVNNLVLIR 430

Query: 433 ARAYGVDKSDKASYPAFTSNDQSTLRHQLRVERRMEMAKEHMRYTDIIRWKLAEKVMNRK 492
            RA G+       Y    +  +  LR  ++ ERR+E+A E  R  D+ RWKLAE  +N+ 
Sbjct: 431 KRA-GILPGSNNLYGLSLTLSKDELRKIIQNERRIELAFEEHRTWDLRRWKLAEIELNKP 489

Query: 493 TYGILYPASLCIERVTSQGDWFWAFTPEMDEDGCADFSKLEEAGKCQALAVRSWNDRQYL 552
             G+                       ++ ++G A       A      A   ++ + Y 
Sbjct: 490 VRGV-----------------------QIIKNGTAYSYTYFNA------ANAVFDTKMYW 520

Query: 553 WPIPTTELQINENLKQNPGY 572
           +PIP  E+  N  + QNPG+
Sbjct: 521 YPIPQAEILANNKMVQNPGW 540