Pairwise Alignments

Query, 572 a.a., putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 581 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

 Score =  123 bits (309), Expect = 2e-32
 Identities = 141/521 (27%), Positives = 218/521 (41%), Gaps = 101/521 (19%)

Query: 93  WGNQYKAISRANAVIEKSHRAIENGASATTINRLIAEAKFHRAAAYAKLIVKFGDLPLVL 152
           W N Y  I R N  +    R+  + A   T+     EA+F RA  Y  L+  +  +P++ 
Sbjct: 121 WNNCYNNIRRVNVFLANVDRSPISAARRATLK---LEARFLRAYYYWHLLRNYSGVPVIG 177

Query: 153 TDV-STEEGLTMGRTDKSIVLAQIYKDFDDAISVLP--TSYTDQQRATQGAALALKARVA 209
             V +  +   + R+  +  +  +  + D A + LP  T   D  R T+GAAL LK++V 
Sbjct: 178 DKVYAITDDFGLARSTFAETVNYVVSELD-ACAALPVTTQIEDFGRPTKGAALGLKSKVL 236

Query: 210 LIMED--------------------------WETAADAAKAVMDLNIYEL------HPDF 237
           L+                             W+ AADAAKAVMD+ IY L       P +
Sbjct: 237 LLAASPLFNGQNPGTGANKNLAGYENLDNNRWKLAADAAKAVMDMGIYNLVKDNTTAPGY 296

Query: 238 GNLFLSTTKNSNEFIFKIPRDAT--YDIYLGTGNGGVNQVYNDLPRNVGGWTQTCPSWEL 295
           G   +  T+N+ E IF++ +     Y+ +L             LP + GG   + P+ EL
Sbjct: 297 GYYQMMITRNTPEHIFQVMKSTNRWYEGFL-------------LPVSRGGQAYSYPTQEL 343

Query: 296 LAAFTCTDGLLINESPL-FDPHEPFANRDPRLAETIVPFGSNHLGYEYNPHPEALTCMNY 354
           +  +   +G  I E+   +   + + +RDPR   +I+  GS  L    N         N 
Sbjct: 344 VDTYPMKNGKNIKEAGSGYVEADMYKDRDPRFYYSILYDGSLWLNNTTNTKTVVNLYANA 403

Query: 355 NTGEIVTNYDTRANAQYASF--DGLVWKKGIDETWLQNGFKVDQDIIYCRYAEILLTYAE 412
               + T+  T+    Y  F  +G     GI           +  ++  RYAEILL YAE
Sbjct: 404 PGDGLGTSGSTKTGYLYRKFCHEGAGGNFGISN---------NIGLVAIRYAEILLNYAE 454

Query: 413 AKIELNEIDNSVLDALNEVRARAYGVDKSDKASYPAFTSNDQSTLRHQLRVERRMEMA-K 471
           A  E +     V  A+ ++R RA  V        P+  S +Q  +R  +R ERR+E+  +
Sbjct: 455 ALNEFSGPSTEVYQAVEQIRERAGLV----PFQLPSQLSKEQ--MREVIRNERRVELTYE 508

Query: 472 EHMRYTDIIRWKLAEKVMNRKTYGILYPASLCIERVTSQGDWFWAFTPEMDEDGCADFSK 531
           E +R+ DI RWKLAE ++N    G+ +  S      T  G  F   T             
Sbjct: 509 EAIRFFDIKRWKLAETLINGPANGMRWTRS----GSTVTGARFSFETR------------ 552

Query: 532 LEEAGKCQALAVRSWNDRQYLWPIPTTELQINENLKQNPGY 572
                       R  N + Y +PIP +E+  +  L QNPG+
Sbjct: 553 ------------RFTNPQMYYFPIPQSEINKSTVLIQNPGW 581