Pairwise Alignments

Query, 572 a.a., putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 555 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

 Score =  146 bits (369), Expect = 2e-39
 Identities = 165/611 (27%), Positives = 261/611 (42%), Gaps = 119/611 (19%)

Query: 12  ILLLSACHD--LNLNPLSSGSTENWYSTETEVQMAVDELYRYDFWPEDGQQQTDWSDDYT 69
           ++ L AC    L+  PL   S + ++  E ++++  +  Y               SD++ 
Sbjct: 14  VVSLQACRKDFLDRYPLDQISEQTFFKNENDLKLYANNFYSTLLVQTFNTDNN--SDNFV 71

Query: 70  SRDLLTSFDDGTLNGQNAWVTSLWGNQYKAISRANAVIEKSHRAIENGASATTINRLIAE 129
            RD      D  LNG      +     +  + + N  + +  +A     SA+  N   AE
Sbjct: 72  PRD-----KDSFLNGNYVVPNTDANWNWTTVRQLNYFLARYQKA---EVSASVKNIYAAE 123

Query: 130 AKFHRAAAYAKLIVKFGDLPLVLTDVS-TEEGLTMGRTDKSIVLAQIYKDFDDAISVLPT 188
            +F RA AY + +V+FGD+P +  D++ T   L   RT + IV+  +  D + A++ LP 
Sbjct: 124 IRFFRAYAYWRRVVRFGDVPWLSKDLTETSPELYNPRTPRKIVMDSVLNDLNFAVAYLPN 183

Query: 189 -SYTDQQRATQGAALALKARVALIMEDWE-----------------TAADAAKAVMD-LN 229
            +  +Q R  +  A ALK+R+ L    WE                  AADAA AVM+  +
Sbjct: 184 PANAEQDRLNKDIANALKSRICL----WEGTYRKYHNLGDEAPYLRAAADAALAVMNSAS 239

Query: 230 IYELHP------DFGNLFLSTTKNSNEFIFKIPRDATYDIYLGTGNGGVNQVYNDLPRNV 283
            Y ++       D+ NLFL      N+    + R    D+   T +    Q+ +D+P + 
Sbjct: 240 AYAIYSTNNPASDYYNLFLQEELRGNKEAI-MARRYLKDV---TMHNTTRQI-SDIPPSF 294

Query: 284 GGWTQTCPSWELLAAFTCTDGLLINESPLF----DPHEPFANRDPRLAETIVPFGSNHLG 339
                   S   + +F C DG     SPL+     P     NRDPR  + I+  G   + 
Sbjct: 295 --------SKNFVRSFLCKDGKPTALSPLYVNDDTPDNESTNRDPRYTQLIMSRGFV-VT 345

Query: 340 YEYNPHPEALTCMNYNTGEIVTNYDTRANAQYASFDGLVWKKGIDETWLQNGFKVDQDII 399
              +   +A+T         VT Y   ++ +Y S D L +          N  +   D+ 
Sbjct: 346 RNADGTTDAMTLPRIPG--TVTGY---SSVKYRSADPLQF----------NANQSTLDLF 390

Query: 400 YCRYAEILLTYAEAKIELNEIDNSVLD-ALNEVRARAYGVD-------KSDKASYPAFTS 451
             RYAE LL YAEAK EL E D +V+D  +N++RAR    +       K   + +P+   
Sbjct: 391 IFRYAETLLIYAEAKAELGEADQTVIDNTINKIRARVGMANMVVSTLVKDPNSDFPSL-- 448

Query: 452 NDQSTLRHQLRVERRMEMAKEHMRYTDIIRWKL------AEKVMNRKTYGIL---YPASL 502
                L  ++R ERR+E+A+E  R+ D++RWK       AE ++  K    L   YPAS 
Sbjct: 449 ---PVLLDEIRRERRIELAQEGFRFDDLLRWKAGTQINKAETILGMKLTPALKAQYPASQ 505

Query: 503 CIERVTSQGDWFWAFTPEMDEDGCADFSKLEEAGKCQALAVRSWNDRQYLWPIPTTELQI 562
               V    ++   +T                      +  RSWND+ YL+P+P  E  +
Sbjct: 506 VSGIVVDANNYIRVYTD---------------------ITARSWNDKMYLYPLPIQETTL 544

Query: 563 NEN-LKQNPGY 572
           N   L QNPG+
Sbjct: 545 NPKLLPQNPGW 555