Pairwise Alignments

Query, 572 a.a., putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 581 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

 Score =  130 bits (327), Expect = 1e-34
 Identities = 145/543 (26%), Positives = 220/543 (40%), Gaps = 103/543 (18%)

Query: 79  DGTLNGQNAW----VTSLWGNQYKAISRANAVIEKSHRAIENGASATTINRLIAEAKFHR 134
           +GTL+  N W    +   W   Y  I R N ++ K      + A      R+  E KF R
Sbjct: 93  NGTLSPTNFWSGGGLPDFWTTPYANIRRVNLMLSKLPVIPLSEAKK---KRITGELKFLR 149

Query: 135 AAAYAKLIVKFGDLPLVLTDV-STEEGLTMGRTDKSIVLAQIYKDFDDAISVLPTS--YT 191
           A  Y  L++ FG +PL   +V    + + + R+     +  I  + D A ++LP +  Y 
Sbjct: 150 AWYYHLLLINFGGIPLEGDNVYGITDVIDLPRSSFDESVNYITSELDAAANILPVTADYA 209

Query: 192 DQQ--RATQGAALALKARVALIMED----------------------------WETAADA 221
           +Q   RAT+GA LALK+RV L                                W+ AADA
Sbjct: 210 EQDYGRATKGACLALKSRVLLYAASPLFNGGAIAQASAAVKSIVSYPSYSVARWQKAADA 269

Query: 222 AKAVMDLNIYELHPD--------FGNLFLSTTKNSNEFIFKIPRDATYDIYLGTGNGGVN 273
           A+ +++   Y L  D        F N+FL    +   F F  P +  ++ Y         
Sbjct: 270 AETLINTGTYSLFEDNVTAPGYGFYNVFLKRVNSEYIFTFNRPSNRDFEGY--------- 320

Query: 274 QVYNDLPRNVGGWTQTCPSWELLAAFTCTDGLLINESPL-FDPHEPFANRDPRLAETIVP 332
             YN  P + GG   + P+ +L AAF   +G  I +    +D   P+ NRDPR   +I+ 
Sbjct: 321 --YN--PPSRGGAKNSTPTQQLAAAFPMKNGKAITDPTSGYDAANPYTNRDPRFGYSIIY 376

Query: 333 FGSNHLGYEYNPHPEALTCMNYNTGEIVTNYDTRANAQYASFDGLVWKKGIDETWLQNG- 391
             S +    Y+        +N   G     Y +  N    +  G   +K  DE    N  
Sbjct: 377 NQSLY----YSTTTSTKIVVNTYNGAPTDGYTS--NGTGPTTTGYYARKMCDENISSNSS 430

Query: 392 FKVDQDIIYCRYAEILLTYAEAKIELNEIDNSVL--DALNEVRARAYGVDKSDKASYPAF 449
           F  ++     RYAEILL YAEA   +NE   + L    L  +R RA G+       Y   
Sbjct: 431 FNTERGWPLIRYAEILLNYAEA---INETGQTALAYPKLVAIRKRA-GITAGADNLYGLK 486

Query: 450 TSNDQSTLRHQLRVERRMEMAKEHMRYTDIIRWKLAEKVMNRKTYGILYPASLCIERVTS 509
            +     +R  ++ ERR+E+  E  R+ DI RWK+A  V N     I          +T 
Sbjct: 487 ANMSVDEMRAVIQNERRIELMNEDHRWNDIRRWKIAVDVNNGFNKAI---------NITK 537

Query: 510 QGDWFWAFTPEMDEDGCADFSKLEEAGKCQALAVRSWNDRQYLWPIPTTELQINENLKQN 569
            G+    +T ++                   +    +N + YL PIP +E+    ++ QN
Sbjct: 538 TGN---VYTYQV----------------VNTIRQHVFNPQHYLMPIPQSEVSKMPSMLQN 578

Query: 570 PGY 572
           PGY
Sbjct: 579 PGY 581