Pairwise Alignments

Query, 572 a.a., putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 565 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

 Score =  136 bits (342), Expect = 3e-36
 Identities = 144/520 (27%), Positives = 221/520 (42%), Gaps = 104/520 (20%)

Query: 92  LWGNQYKAISRANAVIE-------KSHR---AIENGASATTINRLIAEAKFHRAAAYAKL 141
           ++GN Y+ I + N   E       K H     I N  +    +RLI E  F RA  Y  +
Sbjct: 111 MYGNSYRGIRKCNVFFENIGKVQVKDHGKDLVINNITATVQRDRLIGEVFFLRAYYYFDM 170

Query: 142 IVKFGDLPLVLTDVSTEEGLTMGRTDKSIVLAQIYKDFDDAISVLPTSYTDQQ------R 195
           + ++G +P+ L  +S ++ + + R     V+ +I  D D A   LP +Y          +
Sbjct: 171 LKRYGGVPITLQSLSFQDDINLPRKTYDEVVKRIVLDCDSAFKRLPDTYIGSPTENYYGK 230

Query: 196 ATQGAALALKARVALI-----------MEDWETAADAAKAVMDLNIYELHP------DFG 238
           AT+ +A ALKAR  L            +  W  AA+AAK   D     +         + 
Sbjct: 231 ATKWSAAALKARTLLYAASPLNNPNNDLTKWTLAAEAAKPFNDGTTSAMFTLATGILGYE 290

Query: 239 NLFLSTTKNSNEFIFKIPRDATYDIYLGTGNGGVNQVYNDLPRNVGGWTQTCPSWELLAA 298
            LF + T  + E I+   R AT    L + N  V +V  +     GG    CPS  L+ A
Sbjct: 291 GLFKTNTSTNKEIIWS--RVATNSNTLESANFPVGEVNGN-----GG---VCPSQYLVDA 340

Query: 299 FTCTDGLLINESPLFDPHEPFANRDPRLAETIVPFGSNHLGYEYNPHP-EALTCMNYNTG 357
           +   DGL    SPL+    P+ANRDPR A +I           YN  P +A T   ++ G
Sbjct: 341 YEMKDGLPYTTSPLYSAANPYANRDPRFAVSIF----------YNGSPIKARTVETFDGG 390

Query: 358 EIVTNYDTRANAQYASFDGLVWKKGID---ETWLQNGFKVDQDIIYCRYAEILLTYAEAK 414
               +   ++N    S  G   +K ID   +          ++ I+ R AE++L YAEA 
Sbjct: 391 ---MDGPQKSN---GSRTGYYMRKHIDAAIDLGAATPGTTQRNWIHFRLAEMILNYAEAL 444

Query: 415 IELNEIDNSVLDALNEVRARAYGVDKSDKASYPAFTSN-DQSTLRHQLRVERRMEMAKEH 473
            E     N V  A+N VR         ++ + P   +   Q  +R ++R ERR+E++ E 
Sbjct: 445 NEAQGPINEVYTAMNLVR---------NRVTMPVLPAGLTQEGMRERIRNERRIELSFEG 495

Query: 474 MRYTDIIRWKLAEKVMNRKTYGILYPASLCIERVTSQGDWFWAFTP-EMDEDGCADFSKL 532
            RY D  RW +A+ V NRK  G+         ++   G  F  +TP +M++         
Sbjct: 496 HRYWDARRWNIAKDVFNRKMRGM---------KIQKTGTTF-TYTPYDMEQ--------- 536

Query: 533 EEAGKCQALAVRSWNDRQYLWPIPTTELQINENLKQNPGY 572
                      + + +    +P    +LQ N NL QNPG+
Sbjct: 537 -----------KVFTENMNRYPFLFFDLQSNPNLVQNPGW 565