Pairwise Alignments

Query, 446 a.a., two-component system response regulator (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 478 a.a., Nitrogen regulation protein NR(I) from Pseudomonas fluorescens FW300-N2E2

 Score =  288 bits (736), Expect = 3e-82
 Identities = 160/460 (34%), Positives = 265/460 (57%), Gaps = 24/460 (5%)

Query: 4   ILIIDDEVQIRSLLARMLGLEGYEVCQAGDCKAAIRQLEIQQPDVALCDVFLPDGNGVDL 63
           + I+DD+  IR +L + L  EG            + +L  QQPDV + D+ +P  +G+DL
Sbjct: 7   VWIVDDDRSIRWVLEKALQQEGMTTQSFDSADGVMSRLARQQPDVIISDIRMPGASGLDL 66

Query: 64  VLNIKKTAPNVEVILLTAHGNIPDGVQAIKNGAFDYITKGDDNNKIIPLISRAVEKAKMN 123
           +  I++  P + VI++TAH ++   V + + GAF+Y+ K  D ++ + L+ RA + A+  
Sbjct: 67  LARIREQHPRLPVIIMTAHSDLDSAVASYQGGAFEYLPKPFDVDEAVSLVKRANQHAQEQ 126

Query: 124 VRLEKLEKKVSQLYSFDSILGESKVLKEAVMLAQKVSVTDVPVLLTGETGTGKEVFAQAI 183
             +E+    V  L     I+GE+  ++E      ++S +++ VL+ GE+GTGKE+ A A+
Sbjct: 127 QGMEE----VPALARTPEIIGEAPAMQEVFRAIGRLSHSNITVLINGESGTGKELVAHAL 182

Query: 184 HYNSKRSKQSFVAVNCSSFSKELLESEMFGHKAGSFTGALKDKKGLFEEANNGTIFLDEI 243
           H +S R+   F+A+N ++  K+L+ESE+FGH+ G+FTGA   ++G FE+A+ GT+FLDEI
Sbjct: 183 HRHSPRAASPFIALNMAAIPKDLMESELFGHEKGAFTGAANLRRGRFEQADGGTLFLDEI 242

Query: 244 GEMAFELQAKLLRILETGEYIKIGDTKPTHVNVRIIAATNRNLTEEIKAGRFREDLFYRL 303
           G+M  + Q +LLR+L  GE+ ++G   P  V+VRIIAAT++NL   + AG+FREDLF+RL
Sbjct: 243 GDMPADTQTRLLRVLADGEFYRVGGHTPVKVDVRIIAATHQNLETLVHAGKFREDLFHRL 302

Query: 304 SVFQVHLPALRERTGDIRILATAFAKSFSEKLSYTVNEMTPAFLHALEQQPWKGNIRELR 363
           +V ++H+P L +R  DI  LA  F    +++L+     +       L+  PW GN+R+L 
Sbjct: 303 NVIRIHIPRLADRREDIPTLARHFLSRAAQELAVEPKLLKSETEEYLKNLPWPGNVRQLE 362

Query: 364 NVIERSLIVCEGGHLDVCDLPLEIQN--------THYECS------------DDNIGSFE 403
           N      ++  G  + + DLP E+ +        T++E +              ++    
Sbjct: 363 NTCRWITVMASGREVHISDLPPELLSLPQDSAPVTNWEQALRQWADQALSRGQSSLLDSA 422

Query: 404 LAAMERRHIARVLEYTKGNKTETARLLKIGLTTLYRKIEE 443
           + + ER  I   L++T G + + A LL  G  TL RKI+E
Sbjct: 423 VPSFERIMIETALKHTAGRRRDAAVLLGWGRNTLTRKIKE 462