Pairwise Alignments

Query, 446 a.a., two-component system response regulator (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 453 a.a., response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains from Dechlorosoma suillum PS

 Score =  289 bits (739), Expect = 1e-82
 Identities = 163/450 (36%), Positives = 267/450 (59%), Gaps = 14/450 (3%)

Query: 1   MSKILIIDDEVQIRSLLARMLGLEGYEVCQAGDCKAAIRQLEIQQPDVALCDVFLPDGNG 60
           M+++L++DD+  I  LLA  L   G+ V  A   + A+   + Q+P + + D+ +   +G
Sbjct: 1   MAELLLVDDDADILKLLALRLATAGHRVRTADSGEQALVMFQAQRPQLVITDLKMGGMDG 60

Query: 61  VDLVLNIKKTAPNVEVILLTAHGNIPDGVQAIKNGAFDYITKGDDNNKIIPLISRAVEKA 120
           + L   I++ AP + VI+LTAHG IP+ V A + G F ++TK  D   ++  + +A+  A
Sbjct: 61  LALFDEIQRRAPTLPVIVLTAHGTIPEAVDATRRGVFGFLTKPFDGKALLEQVEQALRLA 120

Query: 121 KMNVRLEKLEKKVSQLYSFDSILGESKVLKEAVMLAQKVSVTDVPVLLTGETGTGKEVFA 180
               +        ++ +  D ++G S  ++E +  A+ V+ +D  V + G +GTGKE+ A
Sbjct: 121 SPAGQ----GGGENEPWRAD-LVGGSPAMQELLERARLVAASDASVFIAGASGTGKELLA 175

Query: 181 QAIHYNSKRSKQSFVAVNCSSFSKELLESEMFGHKAGSFTGALKDKKGLFEEANNGTIFL 240
           +AIH  S R+ + FVA+NC++  + LLESE+FGH+ G+FTGA  + KGLF EA+ GT+FL
Sbjct: 176 RAIHLASPRADKPFVAINCAAIPENLLESELFGHRKGAFTGATYNHKGLFLEADGGTVFL 235

Query: 241 DEIGEMAFELQAKLLRILETGEYIKIGDTKPTHVNVRIIAATNRNLTEEIKAGRFREDLF 300
           DEIG+M   LQAKLLR+L+  +   +G T+   V+VR+++AT+R+L E +K+G+FREDL+
Sbjct: 236 DEIGDMPLSLQAKLLRVLQERQVRPVGATQAVPVDVRVVSATHRDLDELLKSGQFREDLY 295

Query: 301 YRLSVFQVHLPALRERTGDIRILATAFAKSFSEKLSYTVNEMTPAFLHALEQQPWKGNIR 360
           YRL+V  + LP L ER  DI +LA  F +  + +    V    P  + AL   PW GN+R
Sbjct: 296 YRLNVVSLALPLLAERREDIPLLANHFLQRTASRYGKPVTAFAPDAMEALVTAPWPGNVR 355

Query: 361 ELRNVIERSLIV--CEGGHLDVCDLPLEIQNTHYECSDDNIGSFELA--AMERRHIARVL 416
           +L+NV+E+++ +    GG      +P  +        D    S + A    ER ++ R+L
Sbjct: 356 QLQNVVEQAVALSPVSGGL-----VPAALIQGALRSGDSAFTSLDEAKKVFERDYLVRLL 410

Query: 417 EYTKGNKTETARLLKIGLTTLYRKIEEYKI 446
             T+G+ T+ ARL +   T  Y+ +E +++
Sbjct: 411 RLTEGSVTQAARLAQRNRTEFYKLLERHQL 440