Pairwise Alignments

Query, 446 a.a., two-component system response regulator (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 448 a.a., ATPase AAA from Herbaspirillum seropedicae SmR1

 Score =  286 bits (733), Expect = 7e-82
 Identities = 167/452 (36%), Positives = 259/452 (57%), Gaps = 19/452 (4%)

Query: 1   MSKILIIDDEVQIRSLLARMLGLEGYEVCQAGDCKAAIRQLEIQQPDVALCDVFLPDGNG 60
           M++ILI+DD+   R  LA  +   G++V +AG   A ++ L     D A+ D+ +PD +G
Sbjct: 1   MARILIVDDDAAFRGSLAETVSDLGHDVLEAGSTAAGLKLLAAHAVDAAIVDLRMPDEDG 60

Query: 61  VDLVLNIKKTAPNVEVILLTAHGNIPDGVQAIKNGAFDYITKGDDNNKIIPLISRAVEK- 119
           +  +      A  +  I+LTA+ +  + ++AI+ GAFD++TK      ++  + RA+ + 
Sbjct: 61  LAFLQRAPAIAA-IPCIMLTAYASGDNTIEAIRLGAFDHLTKPVPRAALVETLERALRQG 119

Query: 120 AKMNVRLEKLEKKVSQLYSFDSILGESKVLKEAVMLAQKVSVTDVPVLLTGETGTGKEVF 179
           A          ++ +QL      +GES+ +++      + + +D  VL+ GETGTGKE+ 
Sbjct: 120 ASTPAAASPATEERNQL------VGESEAMRQVFKQIGRAATSDATVLVLGETGTGKELV 173

Query: 180 AQAIHYNSKRSKQSFVAVNCSSFSKELLESEMFGHKAGSFTGALKDKKGLFEEANNGTIF 239
           A+A+H N  R+ + FVAVNC++   EL+ESE+FGH  G+F+GA   + G F+EA+ GT+F
Sbjct: 174 ARALHRNGARAARPFVAVNCAAIPAELIESELFGHVKGAFSGATSPRLGRFQEADGGTLF 233

Query: 240 LDEIGEMAFELQAKLLRILETGEYIKIGDTKPTHVNVRIIAATNRNLTEEIKAGRFREDL 299
           LDEIG+M    QAK+LR+L+  E   +G  +   V+VR+IAAT+R+L  EI  GRFREDL
Sbjct: 234 LDEIGDMELATQAKILRVLQERELTPVGGNQSVRVDVRVIAATHRDLQHEITQGRFREDL 293

Query: 300 FYRLSVFQVHLPALRERTGDIRILATAFAKSFSEKLSYTVNEMTPAFLHALEQQPWKGNI 359
           +YRL V  + +PALRER GDI  +A  F +            ++PA    L Q  W GN+
Sbjct: 294 WYRLQVLTIMVPALRERPGDILTIAEHFLRQLG---GDAPKRISPAAARLLLQHAWPGNV 350

Query: 360 RELRNVIERSLIVCEGGHLDVCDLPLEIQNTHYECSDDNIGSFE--------LAAMERRH 411
           RELRN +ER+ ++  G  ++  D+ L  +      S  +  + +        LA +ER  
Sbjct: 351 RELRNTMERAAVMSHGLCIEAEDIGLSARPPAGAASAASAPAIDWDGPLAVALAEVERVM 410

Query: 412 IARVLEYTKGNKTETARLLKIGLTTLYRKIEE 443
           I R L+   GN+ E AR L I    LYR++EE
Sbjct: 411 IERALQGAAGNRAEAARRLGISRQQLYRRLEE 442