Pairwise Alignments

Query, 616 a.a., conserved hypothetical protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 394 a.a., conserved hypothetical protein YCF84 from Synechococcus elongatus PCC 7942

 Score = 53.5 bits (127), Expect = 2e-11
 Identities = 38/169 (22%), Positives = 76/169 (44%), Gaps = 11/169 (6%)

Query: 19  LWRYVDELVGKGLDMSVIAQFFFYSALTLVPISLPLAILLASLITFGNFGERYELLAMKA 78
           ++  V ++   GL +SV AQ F       + ++ P+++LL++L+ +       EL+A+++
Sbjct: 59  VFELVRQVTEAGLPLSVAAQVFLLKMPDFLVLAFPMSMLLSALMAYNRLSSDSELIALRS 118

Query: 79  AGISLLKIMRPLAFFVCGLVAVSFYFQNVVGPIAQTKL-YTLIISMKQKSPELDIPEGVF 137
            GIS  + + P       +  ++F F   V P A  +   TL  ++ Q  P+L+    + 
Sbjct: 119 CGISSYRFILPGILMSIVVTGMTFAFYESVVPAANFQAQVTLQTALNQTRPQLEEKNNIV 178

Query: 138 YSEIPDYNLKIAKKNRKTGMMYDVLIYNLKDGFENAHIIYADSGRMEMT 186
           Y +           +RKT  +  +      DG +   +   D  R E++
Sbjct: 179 YQQF----------DRKTSELARIFYARRYDGEQMRGLTILDFTRGELS 217



 Score = 30.8 bits (68), Expect = 1e-04
 Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 1/55 (1%)

Query: 350 MRKHEIEWHKKITISLSCLLFFFIGAPLG-GIIRKGGLGMPVIVSVMVFIIYYII 403
           +RK E+   +K+ +   C+ F  IGA LG    ++ G      +SV++   YY++
Sbjct: 301 IRKWEVRLQQKLALPFVCVAFGLIGASLGTAPNQRTGRATGFGISVLIIFSYYLL 355