Pairwise Alignments

Query, 616 a.a., conserved hypothetical protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 379 a.a., permease YjgP/YjgQ family protein (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score = 45.8 bits (107), Expect = 3e-09
 Identities = 40/178 (22%), Positives = 82/178 (46%), Gaps = 7/178 (3%)

Query: 30  GLDMSVIAQFFFYSALT--LVPISLPLAILLASLITFGNFGERYELLAMKAAGISLLKIM 87
           GLD+ +      +  LT   + + +P+A +L+  +TF       EL+A+KA G+SL +++
Sbjct: 30  GLDLGLADAVLLFVYLTPFFMLLVVPVACMLSVFLTFLRMSTDRELVALKAGGVSLYQML 89

Query: 88  -RPLAFFV-CGLVAVSFYFQNVVGPIAQTKLYTLIISMKQKSPELDIPEGVFYSEIPDYN 145
             PL F V C L+ +    Q +   +A  +    ++ +      + +  GVF  +IP   
Sbjct: 90  AAPLLFCVLCTLLTLGISLQGLAWGMANFR--ATVMDIANSRARVVVQPGVFNKDIPGLT 147

Query: 146 LKIAKKNRKTGMMYDVLIYNLKDGFENAHIIYADSGRMEMTADKQHLWLHLYSGDLFE 203
           L   + +     +  V++ + +   ++   I A +G +     +  L   L +G L++
Sbjct: 148 LFARQVDPADNRLSQVIVED-RSREDSTLTILAPTGAIATDEARGELLFRLQNGRLYK 204



 Score = 38.9 bits (89), Expect = 4e-07
 Identities = 23/91 (25%), Positives = 44/91 (48%), Gaps = 8/91 (8%)

Query: 347 DYSMRKHEIEWHKKITISLSCLLFFFIGAPLG----GIIRKGGLGMPVIVSVMVFIIYYI 402
           D  +RK  +E HK+     +CL+      PL     G+ R+ G    V++++++F++YY 
Sbjct: 260 DKLLRKVAVEVHKRWVFPAACLVLGLFAMPLACAFEGLHRQFG----VVLALLMFLVYYS 315

Query: 403 IDNTGYKMARDGRWVVWMGVWTSSAVLAPLG 433
           + + G      G     +G+WT + +    G
Sbjct: 316 LLSFGLTTGEAGTIAPEVGLWTPNVLFLGAG 346