Pairwise Alignments

Query, 616 a.a., conserved hypothetical protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 366 a.a., Predicted permeases from Sphingomonas koreensis DSMZ 15582

 Score = 47.4 bits (111), Expect = 1e-09
 Identities = 25/75 (33%), Positives = 43/75 (57%), Gaps = 3/75 (4%)

Query: 37  AQFFFYSALT---LVPISLPLAILLASLITFGNFGERYELLAMKAAGISLLKIMRPLAFF 93
           AQ + Y  L    ++   LP ++LL ++IT     +  E++AMKA+G+S  +++ PL   
Sbjct: 57  AQIWRYVGLRTPQIIATFLPFSVLLGTIITLSTLNQNSEVIAMKASGLSAHQVLAPLMIA 116

Query: 94  VCGLVAVSFYFQNVV 108
             G+ A+SF F + V
Sbjct: 117 GLGVAAISFTFNDRV 131



 Score = 37.0 bits (84), Expect = 1e-06
 Identities = 22/87 (25%), Positives = 42/87 (48%), Gaps = 2/87 (2%)

Query: 357 WHKKITISLSCLLFFFIGAPLG-GIIRKGGLGMPVIVSVMVFIIYYIIDNTGYKMARDGR 415
           WHK ++  LS +L   +GA    GI R G L +  ++ + +  +Y++ DN    M   G 
Sbjct: 281 WHK-LSGPLSAVLMPLLGAVAAFGIARSGKLFVRAVMGMGLGFLYFVADNFALAMGNLGA 339

Query: 416 WVVWMGVWTSSAVLAPLGAFLTYKSNK 442
           +  ++  W    + A +G  +  K+ +
Sbjct: 340 YPPFLAAWAPFLLFAMIGEAVLLKTEE 366