Pairwise Alignments

Query, 455 a.a., putative DNA repair protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 487 a.a., DNA repair protein RadA from Sinorhizobium meliloti 1021

 Score =  412 bits (1058), Expect = e-119
 Identities = 210/435 (48%), Positives = 295/435 (67%), Gaps = 20/435 (4%)

Query: 1   MAKEKTVYVCSNCGQESPKWVGKCPSCGEWNTYVEEIVRKETTNRRPVSGI------ETQ 54
           MAK +T +VC NCG    +WVGKC  CGEWNT +E+          P +GI        +
Sbjct: 21  MAKARTQFVCQNCGTVHSRWVGKCDGCGEWNTIIED---------NPTAGIGGGPMRTPK 71

Query: 55  KAKPVILSEI--EADDEPRINMHDDELNRVLGGGLVPGSLVLIGGEPGIGKSTLVMQTVL 112
           K +PV L+ +  E +D PRI     EL+RV GGG V GS +L+GG+PGIGKST++MQ   
Sbjct: 72  KGRPVALTTLSGEIEDAPRIQTGISELDRVTGGGFVRGSALLVGGDPGIGKSTVLMQAAA 131

Query: 113 RMPDKK--ILYVSGEESARQLKLRADRLSEVSSDCLIVCETSLEQIYVHI-KNTSPDLVI 169
            +  +K  ++YVSGEE+  Q++LRA RL    SD L+  ET++E I   + +   PDLVI
Sbjct: 132 ALARRKHRVIYVSGEEAIAQVRLRAQRLGAADSDVLLAAETNVEDILATLSEGKRPDLVI 191

Query: 170 IDSIQTISTENIESSPGSIAQVRECSASILRFAKETHTPVLLIGHINKEGSIAGPKVLEH 229
           IDSIQT+ ++ ++S+PG++ QVR    +++RFAK+T T V+L+GH+ KEG IAGP+V+EH
Sbjct: 192 IDSIQTLWSDIVDSAPGTVTQVRTGVQAMIRFAKQTGTAVVLVGHVTKEGQIAGPRVVEH 251

Query: 230 IVDTVLQFEGDQHYMYRILRSIKNRFGSTAELGIYEMRQDGLRQVSNPSELLLSQDHEGM 289
           +VD VL FEGD+ + YRILR++KNRFG T E+G++EM   GLR+V+NPSEL L + +   
Sbjct: 252 MVDAVLYFEGDRGHHYRILRTVKNRFGPTDEIGVFEMSDKGLREVANPSELFLGERNAKS 311

Query: 290 SGVAIASAIEGVRPFLIETQALVSSAVYGNPQRSATGFDIRRMNMLLAVLEKRVGFKLAQ 349
            G A+ + +EG RP L+E QALV+    G P+R+  G+D  R++M+LAVLE   G +L Q
Sbjct: 312 PGAAVFAGMEGTRPVLVEVQALVAPTSLGTPRRAVVGWDSARLSMILAVLEAHCGIRLGQ 371

Query: 350 KDVFLNIAGGLKVNDPAIDLAVISAILSSNMDAAVEPEVCMAGEIGLSGEIRPVNRIEQR 409
            DV+LN+AGG ++++PA DLAV SA++SS    A+ P+    GE+ LSG +RPV    QR
Sbjct: 372 HDVYLNVAGGYRISEPAADLAVASALVSSLAGLALPPDCVYFGEVSLSGAVRPVAHTAQR 431

Query: 410 IGEAEKLGFKRFLLP 424
           + EAEKLGF + +LP
Sbjct: 432 LKEAEKLGFSQAVLP 446