Pairwise Alignments

Query, 455 a.a., putative DNA repair protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 457 a.a., DNA repair protein RadA from Dechlorosoma suillum PS

 Score =  393 bits (1010), Expect = e-114
 Identities = 208/458 (45%), Positives = 302/458 (65%), Gaps = 10/458 (2%)

Query: 1   MAKEKTVYVCSNCGQESPKWVGKCPSCGEWNTYVEEIVR---KETTNRRPVSGIETQKAK 57
           MAK K++Y C+ CG +SPKW G+C +C  WNT VE +     K + +R       T + +
Sbjct: 1   MAKTKSIYTCTECGAQSPKWQGQCSACNAWNTLVETVAEAGGKGSGHRFESLAPGTPRLQ 60

Query: 58  PVILSEIEADDEPRINMHDDELNRVLGGGLVPGSLVLIGGEPGIGKSTLVMQTVLRM-PD 116
              LSEIE  +  R+     E +R LGGGLV G +VLIGG+PGIGKSTL++Q +  + P 
Sbjct: 61  A--LSEIETREAARLPTGLSEFDRALGGGLVAGGVVLIGGDPGIGKSTLLLQALAALAPQ 118

Query: 117 KKILYVSGEESARQLKLRADRLSEVSSDCLIVCETSLEQIYVHIKNTSPDLVIIDSIQTI 176
            K+LYVSGEES +Q+ LRA RL        ++ E +LE+I   ++   P + +IDSIQT+
Sbjct: 119 HKVLYVSGEESGQQVALRARRLQLDVERLPLLAEINLERILGVVQTEKPQVAVIDSIQTL 178

Query: 177 STENIESSPGSIAQVRECSASILRFAKETHTPVLLIGHINKEGSIAGPKVLEHIVDTVLQ 236
            ++ + S+PGS+AQVREC+A + R AK+T   V+L+GH+ KEG++AGP+VLEHIVDTVL 
Sbjct: 179 WSDQLTSAPGSVAQVRECAAQLTRLAKQTGVTVILVGHVTKEGALAGPRVLEHIVDTVLY 238

Query: 237 FEGDQHYMYRILRSIKNRFGSTAELGIYEMRQDGLRQVSNPSELLLSQDHEGMSGVAIAS 296
           FEGD H  +R++R++KNR+G+  ELG++ M   GL+ VSNPS L LSQ  + ++G  +  
Sbjct: 239 FEGDTHSSFRLIRAVKNRYGAVNELGVFGMTDKGLKGVSNPSALFLSQHGQEVAGSCVLV 298

Query: 297 AIEGVRPFLIETQALVSSAVYGNPQRSATGFDIRRMNMLLAVLEKRVGFKLAQKDVFLNI 356
             EG RP L+E QALV + + G+P+R + G +  R+ MLLAVL +  G     +DVF+N 
Sbjct: 299 TQEGTRPLLVEIQALVDTTMGGSPRRLSVGLEQNRLAMLLAVLHRHAGIGCFDQDVFVNA 358

Query: 357 AGGLKVNDPAIDLAVISAILSSNMDAAVEPEVCMAGEIGLSGEIRPVNRIEQRIGEAEKL 416
            GG+K+++PA DL V+ AI+SS  +  +  ++ + GE+GL+GEIRP  R ++R+ EA KL
Sbjct: 359 VGGVKISEPAADLPVLLAIISSLKNRPLPEKLVVFGEVGLAGEIRPAPRGQERLKEAAKL 418

Query: 417 GFKRFLLPKYNLQGIDTQKLK-IELVPVRKVEEAFRAL 453
           GF R L+P+ N      Q L  +E+V V ++E+A   L
Sbjct: 419 GFTRALVPEANK---PRQPLPGLEVVAVSRIEQAVERL 453