Pairwise Alignments

Query, 455 a.a., putative DNA repair protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 492 a.a., DNA repair protein RadA (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  340 bits (873), Expect = 5e-98
 Identities = 171/426 (40%), Positives = 263/426 (61%), Gaps = 4/426 (0%)

Query: 3   KEKTVYVCSNCGQESPKWVGKCPSCGEWNTYVEEIVRKE-TTNRRPVSGIETQKAKPVIL 61
           K +  YVC+ CG  +P+W G+CP+C EWNT    +  +E     RP +     +++   L
Sbjct: 2   KLRETYVCTACGARAPQWRGQCPACKEWNTLELTVAPREGKAGARPGASSVGAQSRAQPL 61

Query: 62  SEIEADDEPRINMHDDELNRVLGGGLVPGSLVLIGGEPGIGKSTLVMQTV--LRMPDKKI 119
            ++            D L+RVLG GLVPG+ +L+GGEPGIGKSTL++Q    +    + +
Sbjct: 62  KDVADHGAEPFGSGLDALDRVLGKGLVPGAAILVGGEPGIGKSTLLLQVAGAVAAAGRGV 121

Query: 120 LYVSGEESARQLKLRADRLSEVSSDCLIVCETSLEQIYVHIKNT-SPDLVIIDSIQTIST 178
           LY+SGEES  QLK RA RL  +  + + V  T L+ +  H++   +P L+I+DS+QT+S+
Sbjct: 122 LYLSGEESLPQLKARAARLGVLHDELMAVATTRLDDVLPHLEGPEAPALLIVDSVQTVSS 181

Query: 179 ENIESSPGSIAQVRECSASILRFAKETHTPVLLIGHINKEGSIAGPKVLEHIVDTVLQFE 238
           +  E  PG+++QVR  S  I+   K + T VLL+GH+ K+G++AGP++LEH+VDTV+  E
Sbjct: 182 DRAEGLPGNVSQVRAVSTEIVEACKRSGTTVLLVGHVTKDGALAGPRLLEHLVDTVISIE 241

Query: 239 GDQHYMYRILRSIKNRFGSTAELGIYEMRQDGLRQVSNPSELLLSQDHEGMSGVAIASAI 298
           GD+  M+R+LR +KNRFG   EL ++ M + G+  V +PS   L      +SG A+  A+
Sbjct: 242 GDRRQMFRLLRVLKNRFGPNQELLVFRMVEQGMEVVEDPSTFFLGARDPALSGTALVMAV 301

Query: 299 EGVRPFLIETQALVSSAVYGNPQRSATGFDIRRMNMLLAVLEKRVGFKLAQKDVFLNIAG 358
           +G RP  +E QALV+ +    P+R+  GFD+ R+++LLAVLEKR+     Q D++  I G
Sbjct: 302 DGQRPLAVEVQALVTRSYLAIPRRTGLGFDVNRLHLLLAVLEKRLRLNFGQVDIYAKIGG 361

Query: 359 GLKVNDPAIDLAVISAILSSNMDAAVEPEVCMAGEIGLSGEIRPVNRIEQRIGEAEKLGF 418
           G+K+ DP +DL +++A+LSS  D  +       GE+ L+G++RPV     R  +A +LG+
Sbjct: 362 GMKLQDPGMDLGLVAAVLSSFYDLPLPERAVFWGEVDLNGQVRPVAAHTIRRDQARRLGY 421

Query: 419 KRFLLP 424
              L P
Sbjct: 422 TPILHP 427