Pairwise Alignments

Query, 1010 a.a., multidrug efflux membrane fusion protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 1036 a.a., acriflavin resistance protein from Pedobacter sp. GW460-11-11-14-LB5

 Score = 1066 bits (2757), Expect = 0.0
 Identities = 530/1010 (52%), Positives = 739/1010 (73%), Gaps = 11/1010 (1%)

Query: 1    MNISELSIRRPVLATVLTIIILLFGFIGYSYLGVREYPSVDNPIISVSCSYPGANADVIE 60
            M+IS  SI+RPVLA V+ ++I+LFG IGY++LGVREYPS+D  ++SV  SYPGAN+D+IE
Sbjct: 1    MSISTTSIKRPVLAIVMNLLIVLFGIIGYTFLGVREYPSIDPTVVSVRTSYPGANSDIIE 60

Query: 61   NQITEPLEQNINGIPGIRSLSSVSQQGQSRITVEFELSVDLETAANDVRDKVSRAQRYLP 120
            +QITEPLE++IN I GIR++SS S QG S IT+EF L  ++E AANDVRDKVS+A R LP
Sbjct: 61   SQITEPLEKSINSIDGIRNISSSSNQGTSNITIEFNLDKNIEEAANDVRDKVSQAARTLP 120

Query: 121  RDCDP-PTVSKADADAMPILMVALQSDKRSLLELSEIADLTVKEQLQTISDVSSVSIWGE 179
            +D D  P VSKADA++ PIL + +QSDKR+ LELS+ A+  + +++QTI  VSSV I G+
Sbjct: 121  KDIDGLPVVSKADANSDPILSMTIQSDKRNTLELSDFAENVIADRIQTIPGVSSVQIQGQ 180

Query: 180  KRYSMRLWLDPVKMAGYGITPIDVKNAVDNENVELPSGSIEGNTTELTIRTLGLMHTADE 239
            ++Y+MR+W+DP K++ YG+T  D+  A+DNENVELPSG I G TTELT++TLG +    +
Sbjct: 181  RKYAMRIWMDPNKLSAYGLTSQDIVTALDNENVELPSGKITGATTELTVKTLGKLTNESQ 240

Query: 240  FNNLIVKEDNNRIVRFSDIGRAELGPADIKSYMKMNGVPMVGVVVIPQPGANHIEIADAV 299
            FNNLI+K D+N++V+  D+G A LGP + ++ ++ +G PMV + +IPQPGAN+++I+   
Sbjct: 241  FNNLILKADSNQVVKLKDVGYAVLGPENEETVLRESGRPMVAIAIIPQPGANYLDISKEF 300

Query: 300  YKRMEQMKKDLPEDVTYSYGFDNTKFIRASINEVKETVYVAFILVIIIIFLFLRDWRVTL 359
            Y R +++K D+P+D+      DNT FI+ S+ EV ET+ ++ +LVI+II+LF RDW +  
Sbjct: 301  YNRFDKLKADIPKDIKLKVALDNTLFIKRSVTEVAETIGLSLVLVILIIYLFFRDWAIAF 360

Query: 360  VPCIVIPVSLIGAFFVMYLAGFSINVLSMLAIVLAVGLVVDDAIVMTENIYIRIEKGMSP 419
             P I IPVSL+  FF+MY  GFSINVLS+LAIVLA GLVVDD IV+TENI+ ++E+GMSP
Sbjct: 361  RPLIDIPVSLVFTFFIMYAFGFSINVLSLLAIVLATGLVVDDGIVVTENIFKKVEEGMSP 420

Query: 420  KEAGIEGAKEIFFAVISTTITLVAVFFPIVFMQGMTGRLFREFSIVISGSVIISSFAALT 479
             EA I+G+ EIFFAVIS +ITL AVF P++F+QG  GRLFREF +VI  +V++S+F +LT
Sbjct: 421  FEAAIKGSNEIFFAVISISITLAAVFLPVIFLQGFVGRLFREFGVVIGAAVLVSAFVSLT 480

Query: 480  FTPMLATKLLIK-REKQNWFYTKTEPFFEGMNRWYSRSLAAFLRKRWLALPFTFITICLI 538
             TPML   L+ K   K + FY  TEP+F  +N  Y  +L  FL KRWL++P   + + LI
Sbjct: 481  LTPMLNAYLMKKGGHKPSRFYNWTEPYFVKLNDAYESNLNKFLDKRWLSVPIILVCMGLI 540

Query: 539  GFLWNAIPAEMAPLEDRSQISINTRGAEGVTYEYIRDYTEDINQLVDSILPDAEAVTARV 598
               W  +P E AP +DRS I+IN    EG ++ Y   +   +NQLV   +P+        
Sbjct: 541  FLFWKILPKETAPYDDRSAININATTPEGASFTYTDQFIMKLNQLVLDSVPEKNVNITIT 600

Query: 599  SSG--------SGNVRITLKDMKDRDYTQMEVAEKISKAVQKKTMARSFVQQQSSFG-GR 649
            S G        SG VR+ L D +DR  +Q ++A+ +++  +K T  ++ V QQ +   GR
Sbjct: 601  SPGFGGSGSVNSGFVRMGLVDPEDRKRSQKDIADMLTRVTKKYTEGKTIVNQQPTISVGR 660

Query: 650  RGSMPVQYVLQATNLEKLQEVLPQFMAKVYENPVFQMADVDLKFSKPEARIRINRDKASV 709
            RG +P+ Y++QA N EKL+E +P FM  V ++P F ++DV+LKF+KPE  + I+RDKA  
Sbjct: 661  RGGLPISYIIQAQNFEKLREKIPLFMDAVSKDPTFTVSDVNLKFNKPEINLTIDRDKAKN 720

Query: 710  MGVSTKNIAQTLQYGLSGQRMGYFYMNGKQYEILGEINRQQRNKPADLKAIYIRSSNGDM 769
            +GVS   IAQTL  GLSGQR  YF+MNGKQY+++G+ +R  R  P DL ++Y+R+  G++
Sbjct: 721  LGVSISAIAQTLNLGLSGQRFSYFFMNGKQYQVIGQFDRGDRKDPLDLSSVYVRNDKGEL 780

Query: 770  IQLDNLIELENGIAPPKLYRYNRFVSATISAGLADGKTIGQGLDEMDKIAKETLDDTFRT 829
            +QLDN++  +   +PP+LYR NRF++AT+SAGLA GK+IG+G+D MD I+K+ LD+TF T
Sbjct: 781  VQLDNVVTAKEESSPPQLYRNNRFIAATVSAGLAPGKSIGEGIDAMDAISKKVLDETFST 840

Query: 830  ALSGDSKEYRESSSSLMFAFILAILLIYLILAAQFESFKDPLIIMLTVPLAIAGALVFMY 889
             LSG+S++++ESSS+  FAF LA+LL+YLIL+AQFESFKDP+II+LTVP+A+AGA + ++
Sbjct: 841  DLSGESRDFKESSSNTFFAFGLALLLVYLILSAQFESFKDPIIIILTVPMAVAGAFLSLW 900

Query: 890  FGDITMNIFSQIGIIMLIGLVAKNGILIVEFANQKQEAGEDKMSAIKDAALQRLRPILMT 949
                + NIFSQIG IMLIGLV KNGILIVEFANQ +E G     AI++AA+ RLRPILMT
Sbjct: 901  LCGQSWNIFSQIGTIMLIGLVTKNGILIVEFANQLKEKGIPIPEAIREAAVSRLRPILMT 960

Query: 950  SASTVLGLIPLAFASGEGANQRIAMGTAVVGGMVVSTLLTMYIVPAIYSY 999
            S +  +G +P+A A G  A  R++MGT +VGG + S +LT++++PAIYSY
Sbjct: 961  SLAIAIGALPIALALGAAAKSRMSMGTVIVGGTLFSLVLTLFVIPAIYSY 1010



 Score = 56.2 bits (134), Expect = 1e-11
 Identities = 36/161 (22%), Positives = 75/161 (46%), Gaps = 4/161 (2%)

Query: 840  ESSSSLMFAFILAILLIYLILAAQFESFKDPLIIMLTVPLAIAGALVFMYFGDITMNIFS 899
            E + ++  + +L IL+IYL       +F+ PLI    +P+++      MY    ++N+ S
Sbjct: 333  EVAETIGLSLVLVILIIYLFFRDWAIAFR-PLI---DIPVSLVFTFFIMYAFGFSINVLS 388

Query: 900  QIGIIMLIGLVAKNGILIVEFANQKQEAGEDKMSAIKDAALQRLRPILMTSASTVLGLIP 959
             + I++  GLV  +GI++ E   +K E G     A    + +    ++  S +     +P
Sbjct: 389  LLAIVLATGLVVDDGIVVTENIFKKVEEGMSPFEAAIKGSNEIFFAVISISITLAAVFLP 448

Query: 960  LAFASGEGANQRIAMGTAVVGGMVVSTLLTMYIVPAIYSYI 1000
            + F  G         G  +   ++VS  +++ + P + +Y+
Sbjct: 449  VIFLQGFVGRLFREFGVVIGAAVLVSAFVSLTLTPMLNAYL 489