Pairwise Alignments

Query, 1010 a.a., multidrug efflux membrane fusion protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 1048 a.a., multidrug resistance protein from Marinobacter adhaerens HP15

 Score =  758 bits (1957), Expect = 0.0
 Identities = 403/1011 (39%), Positives = 630/1011 (62%), Gaps = 10/1011 (0%)

Query: 1    MNISELSIRRPVLATVLTIIILLFGFIGYSYLGVREYPSVDNPIISVSCSYPGANADVIE 60
            M +S++SI+RPV ATVL+++I++FG      L VREYP +D P++S+S  Y GA A+V++
Sbjct: 1    MVLSDVSIKRPVFATVLSLLIVVFGLAALMGLPVREYPDIDPPVVSISTDYTGAAAEVVD 60

Query: 61   NQITEPLEQNINGIPGIRSLSSVSQQGQSRITVEFELSVDLETAANDVRDKVSRAQRYLP 120
             QIT+ +E  I+GI GIRS+ S ++QG+SR ++EF  + D++ AANDVRD VSR    LP
Sbjct: 61   TQITQVIEGAISGIEGIRSIESSTEQGESRTSIEFTTARDVDIAANDVRDAVSRVANQLP 120

Query: 121  RDCDPPTVSKADADAMPILMVALQSDKRSLLELSEIADLTVKEQLQTISDVSSVSIWGEK 180
             + DPP V KAD+DA P++ V L+SD     ELS+ AD  + ++L  +  V+ V I GE+
Sbjct: 121  DEADPPVVRKADSDARPMMWVTLRSDVWDSAELSDFADRVLADRLSVLDGVADVRIGGER 180

Query: 181  RYSMRLWLDPVKMAGYGITPIDVKNAVDNENVELPSGSIEGNTTELTIRTLGLMHTADEF 240
            RY++R+WLD  ++A   IT  +V+ A+   NVELP+GS++ +T   T+R  G +   ++F
Sbjct: 181  RYAIRVWLDRERLAARDITVAEVERALRANNVELPAGSVDSSTRNFTVRAEGRLSNVEQF 240

Query: 241  NNLIVKEDNNRIVRFSDIGRAELGPADIKSYMKMNGVPMVGVVVIPQPGANHIEIADAVY 300
              L+V+ D N ++R  ++   ++G     S ++ NG   +G+ +I Q  AN + ++DAV 
Sbjct: 241  RELVVRRDGNDLLRLGEVANVQMGVESDVSRLRANGQTAIGMGIIRQSKANTVAVSDAVR 300

Query: 301  KRMEQMKKDLPEDVTYSYGFDNTKFIRASINEVKETVYVAFILVIIIIFLFLRDWRVTLV 360
              +E++++ LP +VT +  +D + FIRASI EV  T+ +A  LVI++IFLFLR WR TL+
Sbjct: 301  AELEKIRETLPPEVTIAESYDESIFIRASIKEVVTTLAIAVSLVILVIFLFLRSWRATLI 360

Query: 361  PCIVIPVSLIGAFFVMYLAGFSINVLSMLAIVLAVGLVVDDAIVMTENIYIRIEKGMSPK 420
            P + IPV++IGAF  +   GFSINVL++LA++LA+GLVVDDAIVM ENI  RI++G  P 
Sbjct: 361  PAVTIPVAVIGAFIGLGFLGFSINVLTLLAVILAIGLVVDDAIVMLENIQRRIDEGEPPL 420

Query: 421  EAGIEGAKEIFFAVISTTITLVAVFFPIVFMQGMTGRLFREFSIVISGSVIISSFAALTF 480
             A   GAK++ FAVI+TT+TLVAVF PI FM G  GRLF EF   ++ +V+ SS  ALT 
Sbjct: 421  LAAYRGAKQVAFAVIATTLTLVAVFVPISFMGGNIGRLFAEFGFTLAAAVVFSSLVALTL 480

Query: 481  TPMLATKLL---IKREKQNWFYTKTEPFFEGMNRWYSRSLAAFLRKRWLALPFTFITICL 537
             PML +K L    +  + +  +  +E    G+   Y R L   LR+  L L    + + +
Sbjct: 481  APMLCSKWLRHSPESAEGHRLWAASEKVLNGLTNGYRRLLEFSLRQPGLLLGLGLVGLVI 540

Query: 538  IGFLWNAIPAEMAPLEDRSQISINTRGAEGVTYEYIRDYTEDINQLVDSILPDAEA---- 593
               ++  +P E+AP EDR+ I + T    G T EY   Y   + + +   L +  A    
Sbjct: 541  AAVVYPKLPQELAPTEDRAVIIMPTSAPRGSTVEYTDHYVRQVEETLLPYLDEGIANRLL 600

Query: 594  --VTARVSSGSGNVRITLKDMKDRDYTQMEVAEKISKAVQKKTMARSFVQQQSSFGGRRG 651
              V  R    +  + I L   +DR+  Q EV  +I K +   +  R+        G R  
Sbjct: 601  AIVGFRNEEDNAFMIIGLVPWEDREIKQQEVTSEIRKKLADVSGIRTVAVNPPGLGQRGF 660

Query: 652  SMPVQYVLQATNLEKLQEVLPQFMAKVYENPVFQMADVDLKFSKPEARIRINRDKASVMG 711
            S  V++V+   + E +Q    + + +  ENP  Q  D D + ++PE R+ I+R++A+ + 
Sbjct: 661  SQAVEFVVAGPDYESVQAWSQEIVERAKENPNLQDLDTDFELTRPELRVNIDRERAADLD 720

Query: 712  VSTKNIAQTLQYGLSGQRMGYFYMNGKQYEILGEINRQQRNKPADLKAIYIR-SSNGDMI 770
            ++ +++  TLQ  L+ +++  +   G++Y+++ +     R  P DL  I++R    G++I
Sbjct: 721  ITVEDVGLTLQTMLASRQVTTYIDRGREYDVIIQAEDANRATPEDLGQIFLRPREGGNLI 780

Query: 771  QLDNLIELENGIAPPKLYRYNRFVSATISAGLADGKTIGQGLDEMDKIAKETLDDTFRTA 830
             L  L+ ++   A P L R +R  +  ISA LADG  +G  L  ++ +A + L    R +
Sbjct: 781  PLQALVSVQEIGANPDLRRIDRLPAVVISASLADGYDLGSALTYLNNLAVDNLPPEARVS 840

Query: 831  LSGDSKEYRESSSSLMFAFILAILLIYLILAAQFESFKDPLIIMLTVPLAIAGALVFMYF 890
              G S+E++ESS+++   F LA ++++L+LAAQFES+  PLIIML+VPLA+ GAL+ +++
Sbjct: 841  YKGLSREFQESSAAIYVTFALAFVIVFLVLAAQFESWIHPLIIMLSVPLAVTGALLALWW 900

Query: 891  GDITMNIFSQIGIIMLIGLVAKNGILIVEFANQKQEAGEDKMSAIKDAALQRLRPILMTS 950
              I++NI+SQIGIIML+GL+AKNGILIVEFANQ ++ G +   AI + A  R RP+LMT+
Sbjct: 901  TGISLNIYSQIGIIMLLGLMAKNGILIVEFANQLRDKGYEVREAILEGACLRFRPVLMTT 960

Query: 951  ASTVLGLIPLAFASGEGANQRIAMGTAVVGGMVVSTLLTMYIVPAIYSYIS 1001
             ST+ G +PL  A+G GA  R A+G  ++GG++ +T LT++I+P +Y+ ++
Sbjct: 961  ISTIFGAVPLVIATGAGAESRAAIGMVILGGLIFATTLTLFIIPVLYNLLA 1011